Gene BURPS1710b_A1636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A1636 
SymbolttuB 
ID3693700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp1999964 
End bp2001289 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content69% 
IMG OID637731890 
ProductMFS transporter 
Protein accessionYP_336793 
Protein GI76819458 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCTC CCTCGTCCGT AGCGGCACGG CCCGCGTCGG ATCCGCTGAA CGACGGCTAT 
CGCAAGGTCA CGTTCCGGCT GATTCCGCTG ATCTTCGTCT GCTACCTGTT CAACTACCTC
GATCGCGTGA ACGTCGGCTT CGCGAAGCTG CAGATGCTGA GCGACCTGAA CATGAGCGAG
ACCGTCTACG GGCTCGGCGC GGGCATCTTC TTCATCGGCT ACGTGCTCGC GGGCGTGCCG
AGCAACCTGG TGCTGCGGCG CGTCGGCGCG CGTGCGTGGA TCGCGATCAT CATGGTCGTG
TGGGGCGCGC TGTCGTCCGC GCTGCTGTGC GTGAAGACGC CGGCGTCGTT CTATACGCTG
CGCTTTTTCA CCGGCATCGC GGAAGCCGGC TTCTTCCCGG GCATGGTGCT GTATCTGACG
CAATGGTTCA GCGCCGAGCA TCGCGGCCGT GCGATCGCGC TGTTCATGTC GGCGATCCCG
ATCTCCGGCG TGATCGGCGG CCCGCTGTCG GGCTGGATGC TCGACCACTT CTCGGCGGGC
CAAGGCGGGC TCGCCGGCTG GCAGTGGCTG TTCCTGCTGC AGGGCGCGCC GACGATCGTG
CTCGGCGTCG CGGTGTTCGC GCTGCTCGAG GACCGGATCG ACGACGCGCG CTGGCTGTCG
GCCGACGAGA AGGCCGCGCT CGCCCGCGCG ATCGCGACGA CGGCCGCCGA CGCCGCGATC
GCGTCGGCCG GCCGGCCGAA CACGTTGCGC GACATCCTGC TGAACGGCGC CGTGTGGAAA
TTCGGCATCG TCTATTTCAG CATCCAGATG GGCGTGTACG CGATCAACTT CTGGCTGCCG
TCGATCATCC GCTCGCTCGG CGTCGGCGGC AGCGGCGCGA TCGGCTGGCT GAGCGCGATT
CCGTACCTGT TCGCGAGCGT CGCGATGATC GCGGTCGGCA AATCGGCCGA TGCGCGCCAG
GAGCGCCGCT GGCACCTGAG CGTGCCGATG GCGGTCGGCG TGGCCGGGCT GCTGATGGCC
GCGCAATCGG GCAACGCGAT CGTGCCCGCG ATGATCGGCC TCGTGCTCGC GACGGCCGGC
GCGCTCACCG CGCTCGCGAT GTTCTGGCCG CTGCCGACGC TCGTGCTCAC GGGCTCGGCC
GCCGCCGGCG GCGTCGCGCT GATCAACTCG CTCGGGCAGA TCGCCGGCTT CGTGAGCCCG
TACATCGTCG GCTGGATCAA GGACGCGACG CAGCGCACCG ATCTCGCGCT CTACATTCTG
TCGAGCACGA TGGTCGTCGG CATCGTGCTC GTGATGCGCA CGCACGCGCG CGGAGCCGGC
CGCTGA
 
Protein sequence
MTPPSSVAAR PASDPLNDGY RKVTFRLIPL IFVCYLFNYL DRVNVGFAKL QMLSDLNMSE 
TVYGLGAGIF FIGYVLAGVP SNLVLRRVGA RAWIAIIMVV WGALSSALLC VKTPASFYTL
RFFTGIAEAG FFPGMVLYLT QWFSAEHRGR AIALFMSAIP ISGVIGGPLS GWMLDHFSAG
QGGLAGWQWL FLLQGAPTIV LGVAVFALLE DRIDDARWLS ADEKAALARA IATTAADAAI
ASAGRPNTLR DILLNGAVWK FGIVYFSIQM GVYAINFWLP SIIRSLGVGG SGAIGWLSAI
PYLFASVAMI AVGKSADARQ ERRWHLSVPM AVGVAGLLMA AQSGNAIVPA MIGLVLATAG
ALTALAMFWP LPTLVLTGSA AAGGVALINS LGQIAGFVSP YIVGWIKDAT QRTDLALYIL
SSTMVVGIVL VMRTHARGAG R