Gene BURPS1710b_A1630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A1630 
Symbol 
ID3692618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp1990332 
End bp1990994 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content51% 
IMG OID637731884 
ProductDNA-binding response regulator 
Protein accessionYP_336787 
Protein GI76818490 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0322132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGTTT TTTCCATCAA GGTCGTCATC GCGGACGACC ATCCCGCTGT ATTGACCGGC 
CTGCTCCACG CCCTGGCACC CGTGAGCTCG ATAGAAGTGG TGAGCGCTTG CAAAAACTCC
ACCGAACTGC TGACTGCGCT CAATGAATAT CCTTGCGATG TCGTCATTTC CGACTACAAC
ATGCCGGACG ACAACTTCGG AGATGGCATA TCACTGTTCT CGTATATTCA GAGACGATAT
CCGAGCACCC GGTTGATTGC GCTGACGATG ATCAGCAACC CGGCGATCAT CCATAATCTG
ATATCACACG GTATTTCAAC GGTTCTCAGC AAATCGGATG AGATCGGGCA CATCATCGCG
GCAATTCACG CGAGTTATGC GAAGGGCTCG TATCTTTCTC CGACCATGGA AACGATCGTC
AACAGCGGTC ACGGCAAGTC GCCGGATGGA GAAGTACAGC TATCGCCAAG GGAAATAGAA
GTCGTACGCC TGTTTACATC CGGGTTGTCG GTCAATGAAA TTGCCAACCG CCTGAAGCGA
AGCAAGCAAA CCATTAGCTC TCAGAAAGCC AATGCCATGC GAAAGCTTGG AGTCAACAGC
GACATCGATC TTCTCAAATA TGCGCTGAAA GCAAAGCTTG TCGAGGATAC GAACAGCTAT
TGA
 
Protein sequence
MTVFSIKVVI ADDHPAVLTG LLHALAPVSS IEVVSACKNS TELLTALNEY PCDVVISDYN 
MPDDNFGDGI SLFSYIQRRY PSTRLIALTM ISNPAIIHNL ISHGISTVLS KSDEIGHIIA
AIHASYAKGS YLSPTMETIV NSGHGKSPDG EVQLSPREIE VVRLFTSGLS VNEIANRLKR
SKQTISSQKA NAMRKLGVNS DIDLLKYALK AKLVEDTNSY