| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1615 |
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| Symbol | |
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| ID | 3692236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 1969985 |
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| End bp | 1973437 |
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| Gene Length | 3453 bp |
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| Protein Length | 1150 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637731869 |
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| Product | Rhs1 protein |
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| Protein accession | YP_336772 |
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| Protein GI | 76818340 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGGAA TCAGTGGTCT GGGCGGGATG CTGGCCGGCC TCGAGACCCG GCACGTGACG
TCGCTCGACG TCGAGCGACG GATTGACCGA TACGGAAATC AGCCGGGAAA TTGGGCGGCG
AGGCATGGTG TCGAGCGCGC GCTTTCCGGG TTGCTGCAAC GTTCGGTCGA CGCAGGCTCC
GGCAACAAGG TGTGCCTGGC GGCGGACGAA GTCGACATCA AACTGCCGGG GCGGCTGCCG
ATCATGTGGG CCCGCTACCA TTCAAGCGCA TTGAAGAACG CGGGTTTGCT CGGCCCGGGA
TGGCGCACCG CATGGGAAGC CACCTTGCGG CGCGAGGAGG ATCGGCTCGC CTATACCGAC
GATCAAGGCC GCGTCTTGTC GCTTCCCATG CCGCACCGCG GCTCGCAAGT CATCGTGTCG
TCCGAGCAAT TGCATGTTGC GCATCTTCCC GACGGTCGAA TGGTCGTCGC CGATCTCACG
CCGCATTACA GCGTATTCGG CGAATTCGAC GAAGCCGGCG TTGCTCGGCT GAAATATATC
GAGGATCTTC ACAAGCAACG GATCGGCTGC ATTTGGGACG ATGCGGGCCG CCTGAAGCGT
ATGCGCGGCA CATGCGGGCA CGAACTGAAG ATGCACTACG GCAGCGACGG CCACCGGCTG
ACCGGCATCG AATGCGTCGA TGGCGGGCCG ACAGGATGGC TCGTGCATTA CGGCTACGAC
GACGACGGCC GGCTCGCGGA GGTTCGCAAT CGTATTGGAG ACGTGGTGCG CCGTTTCGTG
TACGAAAACG GCCGTATCGT GCGAGAGGTC GGTCCGCTCG GTCAAACAAC GCAGTACAAG
TGGGAGGTGC GTCGGGGCGC GGCGCGGGTG ATCGAGCGCA GCACGTGCCG TGGCGCGCGC
GATCGCTTCA ACTATGATCC CGATGAGGGC CGCTGCGAGG TAATCGATAC GTTCGGCCAC
GCCGCGCAAT GGAAATTCGA CAGGCAAGGA AACATCTCGA GCCATACGGA TTTTGCGGGA
AGCCGTTATA CGTTTGTCTA CGACAGCGCC GGATGGCCAA CGCAACTGAA CCTGCCCGGC
GATCGGCAAG TCCGCATCAC GTTCGATAAT CTCGGCCGCG TCACGCGGGA AACCGATCCT
CTCGGCGGCG AACGCTCGAC GATCTACGCA TTCGCGACAC GCGAACCCGT GACCGTGCGC
GAGAGCGACG GCAGGCTCTG GGTATGGCGG CACGACGACA GGTTGCGCGC AATCCATCAT
CAATCCCCGT CGCATGGCTC GACGCAAATT GCGTATTCGG AGCACGAGCG CGGAGAGACG
CACAGTTATG TAACGGACAG AGGCACGTCG ATCACGATCG AGCGGGACCG CCGAGGGCAA
GTGATCGGTC TGGGCACCGC GCCCGACAAG GCGACGACGT ATCGCCGCGA CGCCGAAGGG
CGGGTCGTCG AAATCGTCGA TCCGGTCGGC GCGGTAACGA AGATCGAGAA TGACCTGCTC
GGGCGCCCGC TTATCGTGAC GCTGCCCGGC GGCAGACAGG AGCGCCGAGT CTGGAATGCC
GCGGGACAGC TGGTCAAGAT CACGGGGCCC GACGGCTATT CCCGACTTTG GCACCGCGAC
TCGTATGGCC GCGTGGTGCA GTTCGTGGAC GAGGAAGGGA GCGTCACGGC GCACGAATAC
GATGCGCATG GCCGGCGAAT CAGGACTGCG AGCGGCAACG GCGCCACGCA GGAATTCGAA
TGGGGCCCGG CCGACCGCTT GGTGTCGATC GTCGACGCGG ACCGCGTGAC GCGCACCTTG
AGTTACTCGA TGGCAGGCTG GCTGCAGCAG ATTGCGACGA CGGCGGAATC GATGACGCGC
CGCGAAATAT TCGTGCATGA CGCAGTGGGG CGCTTGATCG GCCGCGAGAC GGAGCATGCG
CATTATCACT ACGCTTACAC GCAGCAGGGG CTGCTCGGAA CGATCGACTG TTCTCCGACC
GAAGCCGGAG AGGCGATCGG GGTCGCGGCC GACACAATCC GATTCGAGTA CAACCCGTTC
GGCCTCGTGA CAGCCGAGCA CGGCGGCGCC GGTGTGCTGC ACTACGAGTA TGACGAGCGA
GGCCGAACCC GCGCGGTGAC CCTTCCGGAC GGGTGTGTCG TGAAGAGCGA GCGCGATGAG
GACGGACGCG TCGCGCTGGT CGGCATGACC TGTCGCGAGG AGAGTCGCGG GATCGCCGCG
TTTCGCTACG ACAATCTGGG GCGACAAGTG TTGCGATCAC AAGGCGAGCT CTATCTGCGC
TCCGTCTACA CGTCGGCGTC CGAACTGGAA CGTTGCTTTG CCATGAGCGT GGTCCGAACC
CCGAACAACG AAATGCAGGC GGGTGAAGTA CGGTATTGGC GGGAATTTCA GTACAGCATC
GCCGGCAATA TCACTCAAGT CGGGGATCGC TTCGAAGGGA AAACGTACTG CGATTACGAT
CGTCGGGGGC GCCTGCTTCG AATGTTGTCC GACGAGGTCG GGATCGAATA CTTTACGTGG
GACGCCGCCG GCAACCTGTT CGATACGGCG CATGTTGCCG CAAGCGTGGT GGCGTGCCCG
GATCATCGTA TGCGCGAATA CAAGGGGTAT CAATACGAGT ACGATGCGTG GGGTAATGTG
ATCTGCAAGC GCAGTGCGGC GGCCGAGCAA TCGTTCACAT GGGATGCGGA AGGCAGGCTG
ATGGAGGTTC GCAGTCGCCA GGCGCGGGTT CGTTTCAGAT ATGACGCGCT CGGTCGGCGT
ACGAGCAAAT CGATCGAGCG GCATGACGCC GATCACGCGC GGCAGGCGAA TTCGTCCACG
GAGGTCGTTC ACTTCGTCTG GGAAGGCGAG CGGCTCATGC AGGAGCGCTC GGAGAAAGAG
ATTCGGACCT TTCTGTATCA GCCCGCCGCC GATGGTTTCA TGAGCTACGC ACCGCTTGCT
CGTGTCGATC AGGTGCGGGA CGCGGACGGG AACGTCCAGC CGATGCGCCT GTATCATTAT
CACGTCGATG CGGCCGGCAC CGCGGTGGCG ATGACCGACG ACGCGGGAGC ACTTGCGTGG
GCCGGCCGTT ACTCGGCCTG GGGGCGGATC TTGCCGCCTA CCTCGCTGAA GGTGCAAATC
GATCAGCCGT TGCGATTTGC CGGCCATTAT GCCGACGACG AAGTGCGTCT GCATTTGAAC
GGGACTCGAT ATTACGATCC GGATACGGGC CGATACCTGA GCCCCGACCG CTCCGCGGAG
CCGGGCACGA GCCCGTATCG CTACGTCTCG AATCCGCAAA CCGCTTGTAA TCCGACGGGG
CGTGCGGTAA CGCTTGCACG GCCGCGCGCC GGGAAACGCC TGGGCTCAAG CGTCAAGCGA
ACATTCGATC TCGGCGAGCC GGCGGCCGGC CTCGTCGCAA AGCTCGACGA CGTAGTCGAC
GGGGCGCTGA TCCAGCTCGG ACAAGAAGTC TAG
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| Protein sequence | MSGISGLGGM LAGLETRHVT SLDVERRIDR YGNQPGNWAA RHGVERALSG LLQRSVDAGS
GNKVCLAADE VDIKLPGRLP IMWARYHSSA LKNAGLLGPG WRTAWEATLR REEDRLAYTD
DQGRVLSLPM PHRGSQVIVS SEQLHVAHLP DGRMVVADLT PHYSVFGEFD EAGVARLKYI
EDLHKQRIGC IWDDAGRLKR MRGTCGHELK MHYGSDGHRL TGIECVDGGP TGWLVHYGYD
DDGRLAEVRN RIGDVVRRFV YENGRIVREV GPLGQTTQYK WEVRRGAARV IERSTCRGAR
DRFNYDPDEG RCEVIDTFGH AAQWKFDRQG NISSHTDFAG SRYTFVYDSA GWPTQLNLPG
DRQVRITFDN LGRVTRETDP LGGERSTIYA FATREPVTVR ESDGRLWVWR HDDRLRAIHH
QSPSHGSTQI AYSEHERGET HSYVTDRGTS ITIERDRRGQ VIGLGTAPDK ATTYRRDAEG
RVVEIVDPVG AVTKIENDLL GRPLIVTLPG GRQERRVWNA AGQLVKITGP DGYSRLWHRD
SYGRVVQFVD EEGSVTAHEY DAHGRRIRTA SGNGATQEFE WGPADRLVSI VDADRVTRTL
SYSMAGWLQQ IATTAESMTR REIFVHDAVG RLIGRETEHA HYHYAYTQQG LLGTIDCSPT
EAGEAIGVAA DTIRFEYNPF GLVTAEHGGA GVLHYEYDER GRTRAVTLPD GCVVKSERDE
DGRVALVGMT CREESRGIAA FRYDNLGRQV LRSQGELYLR SVYTSASELE RCFAMSVVRT
PNNEMQAGEV RYWREFQYSI AGNITQVGDR FEGKTYCDYD RRGRLLRMLS DEVGIEYFTW
DAAGNLFDTA HVAASVVACP DHRMREYKGY QYEYDAWGNV ICKRSAAAEQ SFTWDAEGRL
MEVRSRQARV RFRYDALGRR TSKSIERHDA DHARQANSST EVVHFVWEGE RLMQERSEKE
IRTFLYQPAA DGFMSYAPLA RVDQVRDADG NVQPMRLYHY HVDAAGTAVA MTDDAGALAW
AGRYSAWGRI LPPTSLKVQI DQPLRFAGHY ADDEVRLHLN GTRYYDPDTG RYLSPDRSAE
PGTSPYRYVS NPQTACNPTG RAVTLARPRA GKRLGSSVKR TFDLGEPAAG LVAKLDDVVD
GALIQLGQEV
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