| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1604 |
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| Symbol | ompA2 |
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| ID | 3692972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 1954129 |
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| End bp | 1955805 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637731858 |
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| Product | OmpA family protein |
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| Protein accession | YP_336761 |
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| Protein GI | 76819194 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.395642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCGTC AGATTCGATT TTGGCTCGTA TGGGGCGCCA TACCCTTCGT GGTGCTCGCG
AGCCTTTGCC TGCCGTTGCG CATGCAGCCG GAATGGTCTC ATGTGCTGAC CATCGTTCTG
GTCATTGCCG CCATCGTGCT GGCGATCGAA ATATTCGAAC ACTCTCGCGA GACAGCGCAA
GACCGAACGG CCGAAGCCGA AATCGACGAT CACGAACTGG CGGTGATCAT CGTCGCGGGC
CCTCACGCAT CGTCGCTTTT CAATAGCAGC GGGGACGATA CGGCGTTTCG GCGCGAAGCC
GGCGCGTTAT GGCTGCGCGC CGACAGCGTC GAGCAATTGC GAGACACGAT GATGCGCGTC
AAGGCGTCGC GCGGACGGTT CCCGGACGCC GCCGTGGTGC CGCTCGTATC GGAAAGCGAT
GACGAAAGCG ACATGAGGCA GGCGTTCGCG AAGTGGCGAA CCGAACTCCG CGAAGCGCTT
TGCTATCCCG ATGCGGCCTA TGTCCTGCCT TGCTATCTCG CCGTCTACAC GTGTCTTGGA
TTCAAGGGAG CCGACGGCGC GCGTCCGAAG TGGACGGGCG ATGCAATAGA AATCGGCACG
AGGCAGATGA ATGCCGCATC GAAAGTGGGC GAGCTGCTCG CATCGATTCG ACAACAATTG
CTTCGGCCGT CGCCCACCGG TTCGTCGGCG CAGTGCGCGC TGGGGCTCGG CGTGTTCGAT
TGGCTCGACG CCACGGCGCT GCTGTCGTCG ATGACCATGC TGGCGAATAC CCCGCCATTC
ATGCTGAAAG GGCTGACGCT CGCGGATGTC GGCAGACGGC CGATACGTCC GGGAGCGTGG
ACGCGCTGGC TCACTGTTCG GACCGGTCTC CATATTCGCC AGACCAAATC GTCGATGGCG
CCGCTTCCCG TGCCGCGCGT GGCGAAGCAT GCCGAAAGCG GCATTCGGGA AGGATGGAGC
AGCGCGCGCC ATCTCGTTTC CACTCGTGCG AGCTTCGTGC CGGCGCTCGT GTTCTCCACT
GTTTCGACGC TGGGCATCGC CGTGGCGGTC TCGGGCTGGA TGAACAGCCG CATGATCCAG
CGGGTGTCGA ACGATATCGC GGATTATCGG AGCGGAGCCG ACGAGTGGAT CGGGAGGAAG
CGCTTTGCGC AGGCCCGCCT CGAACACGAT CGCACGGCGA TCGTGCAGAC GCTGCTCGAT
GGCGTACCGA CCGGTTTCGG CTGGGGACTC TACCGGGGGC AGGAGTTGCT GGTCAAGCTC
GATACGGTGC TGGATTCGCC GCGCGCGGCG TCGATCGCGA TGCAGCTCGA CACGGTATCG
CTGTTCGCCG CAGGCAAGGC TACATTTTCT CCGGGCGCCG CGCAGCGTGA GTTGCAACAT
GCATTGCGGA TGATTCTCGC CAATCCGGAG CAACGTGTGC TGATCGTCGG TCATGCAGAC
AGCTCCGGCT CGGATGCGGC CAATTTTCAG TTATCCGAAG CGCGTGCGCG CGCGATTCGT
GACTGGTTCG TCGATCAAGG CGTGCTGAAG ACGCGCTTCA TCGTGCAAGG AGCCGGCGAT
ACGCATCCGA TCGCCGATAA CGACAGCCCT TCGGGACGTG CGCAGAATCG CCGTGTCGAG
GTCTTGCTGA TTCCGGACGT TTCTTCCGAC AGGAAGGCGA GCGGTACGGA ACTATAG
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| Protein sequence | MSRQIRFWLV WGAIPFVVLA SLCLPLRMQP EWSHVLTIVL VIAAIVLAIE IFEHSRETAQ
DRTAEAEIDD HELAVIIVAG PHASSLFNSS GDDTAFRREA GALWLRADSV EQLRDTMMRV
KASRGRFPDA AVVPLVSESD DESDMRQAFA KWRTELREAL CYPDAAYVLP CYLAVYTCLG
FKGADGARPK WTGDAIEIGT RQMNAASKVG ELLASIRQQL LRPSPTGSSA QCALGLGVFD
WLDATALLSS MTMLANTPPF MLKGLTLADV GRRPIRPGAW TRWLTVRTGL HIRQTKSSMA
PLPVPRVAKH AESGIREGWS SARHLVSTRA SFVPALVFST VSTLGIAVAV SGWMNSRMIQ
RVSNDIADYR SGADEWIGRK RFAQARLEHD RTAIVQTLLD GVPTGFGWGL YRGQELLVKL
DTVLDSPRAA SIAMQLDTVS LFAAGKATFS PGAAQRELQH ALRMILANPE QRVLIVGHAD
SSGSDAANFQ LSEARARAIR DWFVDQGVLK TRFIVQGAGD THPIADNDSP SGRAQNRRVE
VLLIPDVSSD RKASGTEL
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