| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1582 |
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| Symbol | |
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| ID | 3693249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 1927567 |
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| End bp | 1930143 |
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| Gene Length | 2577 bp |
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| Protein Length | 858 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637731836 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_336739 |
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| Protein GI | 76819042 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.371781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCAATT TGAACGATAC GCTACGCAAT TTTGCGTCGG GGGCGGTCGA CTGGAATAAA
CGTCCGGTCG CGTTGCACTT TGGCGCCGCG CAGGCCGCGC TGGGCCACCT CCTCGCGCTG
CAGCACGCCA GTGTTCAGGA AGGCCTGATG ACCGGGATCC ACGGCCGATT GACCTGCGTG
TCGACCCGCC GCGACCTTCC GCCCGGCGTG TTGCTCGGCA TTCCGGTTTC GATCCGGCTC
ATTACCGACC GCGGACAGCC GCACACGGTG AACGCGATCA TCAGCGGCGT CCAGATCGGC
CAAAGCGACG GCGAGCTCTG TGTGTACCAG CTGACGGTCT GCGACGCGCT GTCGCTGATG
GACAAGCGCA CCAATTCGCG GGTCTTCCGA AAGCGCAGCG TCATCGATGT GCTCGCCACG
CTGTTCAACG AATGGCAGCA GCGCAGCCCG GCCCTCGCGC GCGCGTTCGA ATTCGATCTG
TCCGGCTTGC GCGCCGATCG CTATCCGCCC CGCGAGCTGA CCCGGCAGGT CAACGAATCG
GATGCGCATT TCGTGCGCCG TCTGCTGCGC CGCGAAGGGA TCACCGTGTT CGCGAAGGCG
GGGCCGGCGA AGGGCGAACG GCCGTTGCAG GGCGACGCGC CCGTGCACAC GCTCGTGTGC
TGTGACGATC CGATGTCGTT GCCGCAAGCG CCGGCCGGCA CGGTCCGCCT GCATCCGCGC
GACGGCGGCG CCGCGCAGCG CGACACGGTC ACGCTGTTCG CGCTGCGTCG GCAATTGGCG
CCCGGCAAGG CCGGGCGCCC GTCGTGGGAC TACAAGAAGG CGCGGATCGA CGAATCGAGC
GTCGCTTCGG GCCTCGATCA GGGCGAGGCG GGCAACGATC TGGCGAAGCT GCTGACCGAC
ATCGCGATCG ACATTGCGCA CGCGGGCGAT TCATGGCGCG ATCACGAGCG GCTCACCCGC
GCGCGCATGC TCGCGCACGA GTTCGAAGCC GAGCGCCATG ACGGCGTCAG CAGCGTGCGG
GATCTCGCCG TGGGCACATG GATCACGCTG ACGGGCGATC CGCAATGGGA CAGGCAACGC
GCCGACAAGC GTCAGTTCGT GATCACGTCG ATCGATCACG ACATCTGGAA CAACCTGCCG
AAGGGGCTCA ACGAGCGCGT GCACGCGCTG TTCGCCGCGA GCCGCAATCT CGCGTGCGCG
CCCCGCGCGC TGCCGTCCGC GCTGGCGAAC GACGCGGATA CCCGCTACGA GAACACGTTC
GCGTGCGTGC GCCGCGGCGT GCCGCTTGCG CCCGCGTACG ATCCGCAAGC CGATTTGCCG
CCCGCGCATC TGCTCACGGG CACGATTGTC GGCGCGGAGG GCGAAGAAGT GTTCTGCGAC
GAAGACGGCC GGGTGCGCGT GCGGGTGCAC GGCCTCGATC CGGCGGATCA CGCGCACGCG
CAGGGCGCGG GCACCAACGG CAACGCGGGC GACAGCGCGC CGATCCGCGT GGCGTCGAGC
CTCGCCGGCG CCCATTTCGG CGCATCGTTT CTGCCGCGAG TCGGCATGGA AGTCCTTCTC
GGGTGTCTCG GCGGCGATCC GGACCGGCTG GTGATCATCG GCGTGCTCGG TAACGGCGCG
CATCCGCCGG CGACGTTCAG CCACGCGGGC GGGCTGCCGG GCAACCGCTA CCTGTCGGGC
ATCAAGACGA AGGAGATTCG TGGGCAACGG TACAACCAGC TGCGTCTCGA CGACACGCCG
AACCAGATCA GCGCGCAACT GGCGAGCGAG CACGCGCATT CGCAGCTCAA TCTCGGATAT
CTGACGCAAC CGCGCGAGAA CGGCCACGGG AACGACCGCG GCGAGGGCGT GGAGTTGCGT
ACCGACGCGG CGGCGGCGCT GCGGGCGGCG CAAGGCATGC TGCTGACGAC CTACGCGCGC
ACGCAGGCGA GCGGCGGGCA ACTGGACCGT GACGAGCTGA TTCGGTTGCT CGGCGAATGC
GCGGAGCTGT TCAAGGCGCT GGGCGACTAC GCGGGGCAGC ACGGCGGGCA GGCCGCGGAT
ACGGCCGGCC AGCACGCGGT GGCCGCCGCG TTCAAGCGCT GGGCGCCGGG CACGGGCACG
GACGGCGCAG CGCGCGCGCT GATGGCGTTC GGCGCGCAGG CCGGTTCGGT GAACGTCACG
CCGAAGACGC ATGTGACGTA TGCCGGCGAG AACATCGATC AGGTCGCGCA GCAGCACCTG
CAACTGATGA GCGGCCAGCG GCTGAACGCG ACGGCCGGGC AGGGCATGCA GCTCTTCGCG
CGGGGCGCGG GGGTGCAGGC CGTGGCGGGC GAAGGGCCGA TGCTGCTGCA GGCGCAAGCC
GGCACGCTGA CGGCGAACGC GCAGAAGGGC GTCAAGATCA CGACGAACAC CAGTGGGGCG
GGCCGTCGAC CGCGCAGGCG GCGAAGAGCG GGTTCGGCAA TCAGCCGACG GATCAGCGTT
TCAAGCTGCA CTATCCGGGC GAGGACGGCG ATTTGCAGGC GGCGGCGAAC AAGCGGTTCC
GGATCACGCT GGACGACGGG CGCGTCATCG AAGGCAAGAC CGACGCGAGC GGCCTGA
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| Protein sequence | MTNLNDTLRN FASGAVDWNK RPVALHFGAA QAALGHLLAL QHASVQEGLM TGIHGRLTCV
STRRDLPPGV LLGIPVSIRL ITDRGQPHTV NAIISGVQIG QSDGELCVYQ LTVCDALSLM
DKRTNSRVFR KRSVIDVLAT LFNEWQQRSP ALARAFEFDL SGLRADRYPP RELTRQVNES
DAHFVRRLLR REGITVFAKA GPAKGERPLQ GDAPVHTLVC CDDPMSLPQA PAGTVRLHPR
DGGAAQRDTV TLFALRRQLA PGKAGRPSWD YKKARIDESS VASGLDQGEA GNDLAKLLTD
IAIDIAHAGD SWRDHERLTR ARMLAHEFEA ERHDGVSSVR DLAVGTWITL TGDPQWDRQR
ADKRQFVITS IDHDIWNNLP KGLNERVHAL FAASRNLACA PRALPSALAN DADTRYENTF
ACVRRGVPLA PAYDPQADLP PAHLLTGTIV GAEGEEVFCD EDGRVRVRVH GLDPADHAHA
QGAGTNGNAG DSAPIRVASS LAGAHFGASF LPRVGMEVLL GCLGGDPDRL VIIGVLGNGA
HPPATFSHAG GLPGNRYLSG IKTKEIRGQR YNQLRLDDTP NQISAQLASE HAHSQLNLGY
LTQPRENGHG NDRGEGVELR TDAAAALRAA QGMLLTTYAR TQASGGQLDR DELIRLLGEC
AELFKALGDY AGQHGGQAAD TAGQHAVAAA FKRWAPGTGT DGAARALMAF GAQAGSVNVT
PKTHVTYAGE NIDQVAQQHL QLMSGQRLNA TAGQGMQLFA RGAGVQAVAG EGPMLLQAQA
GTLTANAQKG VKITTNTSGA GRRPRRRRRA GSAISRRISV SSCTIRARTA ICRRRRTSGS
GSRWTTGASS KARPTRAA
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