| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1581 |
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| Symbol | |
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| ID | 3692031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 1924940 |
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| End bp | 1926298 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637731835 |
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| Product | putative ABC transport system, exported substrate-binding protein |
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| Protein accession | YP_336738 |
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| Protein GI | 76818255 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.319599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGGCA TTTCGTCAAA TCACGGTTCC TTTGGCATTG CCCGGTATCG TCGCCGGTGC
GCTGCTTGCG TTCGTCGCGT CTATGAACGA CTACGTCACC AGCTACTTCT TGGCTGGTGC
CGGCATGACC ACCTTGCCTA TGTACATCTT CAGCGCATTG AAGATCGGAA TTACGCCAAA
GGTAAATGCT ATCTCGACAG CCGTCATTGG ACTTTCGTCG ATTCAACTAC TGACGGTCTG
GGTTCTCGGC AGGAAGGGTG CAGGACAGAC TGCTACGCCG GGGAGATCCG AGCTGGGTCA
CGCGAACATT CAAACGATAG GAACCGTATG AAAAAAGTAG TCGGAGCGAT GCTGCTGCTT
GCTGTCGGTC ATGCTGTCTC AGCCGAACTC CATATCGGAA GCTGGCCGGA TTACCTGCCC
GATACGCTGA TCAAGAAGTT CCAGGCGGAA ACCGGCATCA AGACAACGCT CGACACCTAC
GCGAGCGATG CGGCCCTCAC TCAAAAGTTG CAGTCGGGCG GAGGTGGCTA CGACGTTGTG
ATCGCAGGGG ACTATTACGT TCCGGTGCTT GTGAAGTCTG GATTGCTGCA GAAGCTCGAC
AAGAACAAGC TGCCGAATAT CGCCAACATC AAACCCGAGT ATCGCCATCC GTCATTCGAT
CCGCAACGGG ATTATGCGAT GCCATACACC GTCGTGCTGA CTGGTTTCGC GTACGATAGC
GCGCGCGTTT CCGGAGGGAA ACTCGACGAG AGTTGGAAGT CGTTCTTCGA TCCGCCAGCG
CAGTTGCGCG GACAGATCGG CGACCTGGAT GTCGAAGAGG AGCTGTATAT GGCCGCGAGT
TGGTATCTGG GACAGGATGA ATGCACAGAA AATCCTGCTG ATGCGAAGCG GGTGCTCGAC
GTTTTGCAAA AACAGAAACC GTTCGTGAAA ACGTACAGCA ATGACGGAAC CATAGATCGT
CTCGCGTCCA AGCAGATCGC GGTGCAGCAT ATTTGGAGCG GTGCCGCTGC GCGTGCACAG
GACCGTCTTC CCAGCATCAC CTTTGTATAC CCGAGGGAAG GCGTCCGTCT GTTCATGGAT
AGCTTGCTTA TTCCGGCAAA GGCACAAAAC ACCGCCTCGG CATATCAATT CGTTAACTGG
ATGATGCGCC CGGAGAACAT TGCGCAGGTT ACAAATGCCG TTCGCTACAA CAACGAGATC
ATCGGCTCCG AGCGGTATAT CGATGCCGCA CTGTTGAAAA ACTCCGCGAT AAAAACCCCG
GAGCAATACA AAATAAGGCT CCGTCCTTAC AAAATATGTT CGCCGGCGGC GATTCAGTTA
CGAAACAAAG TCTGGCTAAA GTTGAAGGGA AATCGCTGA
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| Protein sequence | MGGISSNHGS FGIARYRRRC AACVRRVYER LRHQLLLGWC RHDHLAYVHL QRIEDRNYAK
GKCYLDSRHW TFVDSTTDGL GSRQEGCRTD CYAGEIRAGS REHSNDRNRM KKVVGAMLLL
AVGHAVSAEL HIGSWPDYLP DTLIKKFQAE TGIKTTLDTY ASDAALTQKL QSGGGGYDVV
IAGDYYVPVL VKSGLLQKLD KNKLPNIANI KPEYRHPSFD PQRDYAMPYT VVLTGFAYDS
ARVSGGKLDE SWKSFFDPPA QLRGQIGDLD VEEELYMAAS WYLGQDECTE NPADAKRVLD
VLQKQKPFVK TYSNDGTIDR LASKQIAVQH IWSGAAARAQ DRLPSITFVY PREGVRLFMD
SLLIPAKAQN TASAYQFVNW MMRPENIAQV TNAVRYNNEI IGSERYIDAA LLKNSAIKTP
EQYKIRLRPY KICSPAAIQL RNKVWLKLKG NR
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