Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1577 |
Symbol | plcN |
ID | 3692487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 1917409 |
End bp | 1919658 |
Gene Length | 2250 bp |
Protein Length | 749 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637731831 |
Product | phospholipase C |
Protein accession | YP_336734 |
Protein GI | 76819491 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3511] Phospholipase C |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCGCAT CGCCGGTTCA TCGCTCGGTC AACCCATACC AAGGACTCCG GAACATGAAC GCTCGTCGCA GATTTCTGCA AGGCACCGCA ACCACCGGCA TCGCGGCCGC CACGTTGGCC GCGTTTCCGC TCAGCATTCG CCGCGCACTC GCGATTCCCG CCAACAACCG CACCGGAACC ATCCGGGATG TCGAGCACAT CGTCATCCTG ATGCAGGAAA ACCGCTCGTT CGACAACTAC TTCGGCACGC TGCGCGGCGT GCGCGGCTTT GGCGACCGCT TCGGCATTCC GCTGCCGAAC GCGCTGACGG TCTGGCAGCA GCGCAACGCG ACGGGCGCGC TGGTGCTGCC CTATCACCTG GACGGCAGCA AGGGCAACGC ACAGCGCGTC AGCGGCACGC CGCACTCGTG GGACGACGGC CAGAACGCGT GGGACGGCGG GCGCATGTAT CAGTGGCCGC GCTACAAGAA CACGGCGTCG ATGGGCTACT TCCGGGAGAG CGAGCTGCCG TTCCAGTTCG CGCTCGCGAA CGCGTTCACG ATCTGCGATG CGTACCACTG CTCGATGCAC GCGGGCACCA ACTCCAACCG GATGTTCATG TGGACCGGCA CCAACGGCCC GACCGGCGCG GGCGTGGCCT CGGTGGTGAA CGAATGGGAC GACATCGGCC CCTCCACGTT CGGCTATGAG TGGAAGACCT ATCCCGAGCG CTTGCAGGAA GCCGGCGTGA GCTGGAAGGT CTACCAGAAC ATGCCGGACA ACTTCACCGA CAACGCGCTT GCCGGCTTCA GGCAGTACCG CCGCGCGAAC GAGGCGTCGG GCAAGCCGGT GAGCAACAGC GACAAGGTGG TTTCGCCCGC ATACGATCCG GCGAGCGACG ACGTTCGCAA CCCGCTGTAC AAGGGCATCG CCAACACGAT GCCCGACGGC GGCTTCCTCG GCGCCTTCAA GGAAGACATC CGTGCGGGCA AGCTGCCGCA GGTGTCGTGG GTGGTGGCGC CGGCCGCGTA TTCCGAGCAT CCGGGGCCGT CGAGCCCGGT GCAGGGCGCG TGGTACATCC AGGAGGTGCT CGATGCGCTC ACCGCGACGC CGGACGTCTG GAGCAAGACC GTGCTGCTCG TGAATTTCGA CGAGAACGAC GGCTACTTCG ACCACGTGCC TTCGCCGTCG GCGCCGTCGC TGAATCCGGA CGGCTCGCCG GCCGGCAAGA CCACGCTGCC CGAGGCCGAC ATCGCGTTCG AGCGCTTCAC CCATCCGAAG CCGCCGGGCA CCAAGAGCCA GCCGCAGCCC GACGCCCGCG TATATGGCCC CGGCGTGCGC GTGCCGATGT ACGTGATCTC GCCGTGGAGC CGCGGCGGCT GGGTCAACTC GCAGGTGTTC GATCACACGT CGACGCTGCG TTTCATCGAG GCGCGCTTCG GTGTGCGCGA GCCCAATATC TCCGCGTTCC GCCGCGCGGT GTGCGGCGAT CTGACGAGCG CGTTCAACTT CGTGCGACCG AACAACGAGC CGCTGCCCAC GCTGGCGGGG CGCAAGACCC GAGCTCAGGC CGATGCGCTG CGCGCCGCGC AGCAGCAGAT GCCGCAGATC GTGCCGCCTG CGAACGGCCT ATTGCCGCGC CAGGAGACAG GCACGCGGCC GTCGCGCGCG TTGCCGTACG AACTGCATGT CAACGCGGTC GCGCGCACGC TCGACGGCAC GCTGCGCCTC GTATTCGCCA ACACGGGGCA GGCCGCGGCC GTGTTCCACG TCTACGACAA GCTGAATCTG GGCCGCCTGC CGCGCCGATA CATGGTCGAG GCCGGCAAGC AGCTCGACGA CGTCTGGGCC GCGATGACGG ACAACGGCGG CAAGTACGAC CTGTGGGTGC TCGGGCCCAA CGGCTTGCAC CGCCATTTCA CCGGCGATAT GAACCGCCTG CGCGCGGGCG GCGCGCCCGT GCCCGAAGTG CGGGTGGAGT ACGACCGCCA GCACGGCAAC GTGCAATTGC TGTTGCGTAA CGAAGGGGCG CGCGAGTGCG TGTTCACCGT GCGCGCGAAG GCGTACCGCG ACGATGGTCC GTGGACCTTC AAGGTCAAGG GCGGCGCCGA GCGCAAGCAT CACTGGAAGC TGGACGGCAG CGGCAATTGG TACGACTTCG TCGTGACCTG CGACGCCGAC ACCGGTTACT CGCGCCGCTT CGCCGGCCGG GTGGAAACCG GCGAGCACTC CGTCAGCGAT CCGGCGATGG GGTTCGGCGA TCGGTTCTGA
|
Protein sequence | MRASPVHRSV NPYQGLRNMN ARRRFLQGTA TTGIAAATLA AFPLSIRRAL AIPANNRTGT IRDVEHIVIL MQENRSFDNY FGTLRGVRGF GDRFGIPLPN ALTVWQQRNA TGALVLPYHL DGSKGNAQRV SGTPHSWDDG QNAWDGGRMY QWPRYKNTAS MGYFRESELP FQFALANAFT ICDAYHCSMH AGTNSNRMFM WTGTNGPTGA GVASVVNEWD DIGPSTFGYE WKTYPERLQE AGVSWKVYQN MPDNFTDNAL AGFRQYRRAN EASGKPVSNS DKVVSPAYDP ASDDVRNPLY KGIANTMPDG GFLGAFKEDI RAGKLPQVSW VVAPAAYSEH PGPSSPVQGA WYIQEVLDAL TATPDVWSKT VLLVNFDEND GYFDHVPSPS APSLNPDGSP AGKTTLPEAD IAFERFTHPK PPGTKSQPQP DARVYGPGVR VPMYVISPWS RGGWVNSQVF DHTSTLRFIE ARFGVREPNI SAFRRAVCGD LTSAFNFVRP NNEPLPTLAG RKTRAQADAL RAAQQQMPQI VPPANGLLPR QETGTRPSRA LPYELHVNAV ARTLDGTLRL VFANTGQAAA VFHVYDKLNL GRLPRRYMVE AGKQLDDVWA AMTDNGGKYD LWVLGPNGLH RHFTGDMNRL RAGGAPVPEV RVEYDRQHGN VQLLLRNEGA RECVFTVRAK AYRDDGPWTF KVKGGAERKH HWKLDGSGNW YDFVVTCDAD TGYSRRFAGR VETGEHSVSD PAMGFGDRF
|
| |