Gene BURPS1710b_A1577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A1577 
SymbolplcN 
ID3692487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp1917409 
End bp1919658 
Gene Length2250 bp 
Protein Length749 aa 
Translation table11 
GC content67% 
IMG OID637731831 
Productphospholipase C 
Protein accessionYP_336734 
Protein GI76819491 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3511] Phospholipase C 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGCAT CGCCGGTTCA TCGCTCGGTC AACCCATACC AAGGACTCCG GAACATGAAC 
GCTCGTCGCA GATTTCTGCA AGGCACCGCA ACCACCGGCA TCGCGGCCGC CACGTTGGCC
GCGTTTCCGC TCAGCATTCG CCGCGCACTC GCGATTCCCG CCAACAACCG CACCGGAACC
ATCCGGGATG TCGAGCACAT CGTCATCCTG ATGCAGGAAA ACCGCTCGTT CGACAACTAC
TTCGGCACGC TGCGCGGCGT GCGCGGCTTT GGCGACCGCT TCGGCATTCC GCTGCCGAAC
GCGCTGACGG TCTGGCAGCA GCGCAACGCG ACGGGCGCGC TGGTGCTGCC CTATCACCTG
GACGGCAGCA AGGGCAACGC ACAGCGCGTC AGCGGCACGC CGCACTCGTG GGACGACGGC
CAGAACGCGT GGGACGGCGG GCGCATGTAT CAGTGGCCGC GCTACAAGAA CACGGCGTCG
ATGGGCTACT TCCGGGAGAG CGAGCTGCCG TTCCAGTTCG CGCTCGCGAA CGCGTTCACG
ATCTGCGATG CGTACCACTG CTCGATGCAC GCGGGCACCA ACTCCAACCG GATGTTCATG
TGGACCGGCA CCAACGGCCC GACCGGCGCG GGCGTGGCCT CGGTGGTGAA CGAATGGGAC
GACATCGGCC CCTCCACGTT CGGCTATGAG TGGAAGACCT ATCCCGAGCG CTTGCAGGAA
GCCGGCGTGA GCTGGAAGGT CTACCAGAAC ATGCCGGACA ACTTCACCGA CAACGCGCTT
GCCGGCTTCA GGCAGTACCG CCGCGCGAAC GAGGCGTCGG GCAAGCCGGT GAGCAACAGC
GACAAGGTGG TTTCGCCCGC ATACGATCCG GCGAGCGACG ACGTTCGCAA CCCGCTGTAC
AAGGGCATCG CCAACACGAT GCCCGACGGC GGCTTCCTCG GCGCCTTCAA GGAAGACATC
CGTGCGGGCA AGCTGCCGCA GGTGTCGTGG GTGGTGGCGC CGGCCGCGTA TTCCGAGCAT
CCGGGGCCGT CGAGCCCGGT GCAGGGCGCG TGGTACATCC AGGAGGTGCT CGATGCGCTC
ACCGCGACGC CGGACGTCTG GAGCAAGACC GTGCTGCTCG TGAATTTCGA CGAGAACGAC
GGCTACTTCG ACCACGTGCC TTCGCCGTCG GCGCCGTCGC TGAATCCGGA CGGCTCGCCG
GCCGGCAAGA CCACGCTGCC CGAGGCCGAC ATCGCGTTCG AGCGCTTCAC CCATCCGAAG
CCGCCGGGCA CCAAGAGCCA GCCGCAGCCC GACGCCCGCG TATATGGCCC CGGCGTGCGC
GTGCCGATGT ACGTGATCTC GCCGTGGAGC CGCGGCGGCT GGGTCAACTC GCAGGTGTTC
GATCACACGT CGACGCTGCG TTTCATCGAG GCGCGCTTCG GTGTGCGCGA GCCCAATATC
TCCGCGTTCC GCCGCGCGGT GTGCGGCGAT CTGACGAGCG CGTTCAACTT CGTGCGACCG
AACAACGAGC CGCTGCCCAC GCTGGCGGGG CGCAAGACCC GAGCTCAGGC CGATGCGCTG
CGCGCCGCGC AGCAGCAGAT GCCGCAGATC GTGCCGCCTG CGAACGGCCT ATTGCCGCGC
CAGGAGACAG GCACGCGGCC GTCGCGCGCG TTGCCGTACG AACTGCATGT CAACGCGGTC
GCGCGCACGC TCGACGGCAC GCTGCGCCTC GTATTCGCCA ACACGGGGCA GGCCGCGGCC
GTGTTCCACG TCTACGACAA GCTGAATCTG GGCCGCCTGC CGCGCCGATA CATGGTCGAG
GCCGGCAAGC AGCTCGACGA CGTCTGGGCC GCGATGACGG ACAACGGCGG CAAGTACGAC
CTGTGGGTGC TCGGGCCCAA CGGCTTGCAC CGCCATTTCA CCGGCGATAT GAACCGCCTG
CGCGCGGGCG GCGCGCCCGT GCCCGAAGTG CGGGTGGAGT ACGACCGCCA GCACGGCAAC
GTGCAATTGC TGTTGCGTAA CGAAGGGGCG CGCGAGTGCG TGTTCACCGT GCGCGCGAAG
GCGTACCGCG ACGATGGTCC GTGGACCTTC AAGGTCAAGG GCGGCGCCGA GCGCAAGCAT
CACTGGAAGC TGGACGGCAG CGGCAATTGG TACGACTTCG TCGTGACCTG CGACGCCGAC
ACCGGTTACT CGCGCCGCTT CGCCGGCCGG GTGGAAACCG GCGAGCACTC CGTCAGCGAT
CCGGCGATGG GGTTCGGCGA TCGGTTCTGA
 
Protein sequence
MRASPVHRSV NPYQGLRNMN ARRRFLQGTA TTGIAAATLA AFPLSIRRAL AIPANNRTGT 
IRDVEHIVIL MQENRSFDNY FGTLRGVRGF GDRFGIPLPN ALTVWQQRNA TGALVLPYHL
DGSKGNAQRV SGTPHSWDDG QNAWDGGRMY QWPRYKNTAS MGYFRESELP FQFALANAFT
ICDAYHCSMH AGTNSNRMFM WTGTNGPTGA GVASVVNEWD DIGPSTFGYE WKTYPERLQE
AGVSWKVYQN MPDNFTDNAL AGFRQYRRAN EASGKPVSNS DKVVSPAYDP ASDDVRNPLY
KGIANTMPDG GFLGAFKEDI RAGKLPQVSW VVAPAAYSEH PGPSSPVQGA WYIQEVLDAL
TATPDVWSKT VLLVNFDEND GYFDHVPSPS APSLNPDGSP AGKTTLPEAD IAFERFTHPK
PPGTKSQPQP DARVYGPGVR VPMYVISPWS RGGWVNSQVF DHTSTLRFIE ARFGVREPNI
SAFRRAVCGD LTSAFNFVRP NNEPLPTLAG RKTRAQADAL RAAQQQMPQI VPPANGLLPR
QETGTRPSRA LPYELHVNAV ARTLDGTLRL VFANTGQAAA VFHVYDKLNL GRLPRRYMVE
AGKQLDDVWA AMTDNGGKYD LWVLGPNGLH RHFTGDMNRL RAGGAPVPEV RVEYDRQHGN
VQLLLRNEGA RECVFTVRAK AYRDDGPWTF KVKGGAERKH HWKLDGSGNW YDFVVTCDAD
TGYSRRFAGR VETGEHSVSD PAMGFGDRF