| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1466 |
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| Symbol | |
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| ID | 3692434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | - |
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| Start bp | 1785679 |
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| End bp | 1788081 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637731720 |
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| Product | sensory box protein |
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| Protein accession | YP_336623 |
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| Protein GI | 76818072 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.475601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACG GGGGTGGCCA GGCGGCCGAA CTGAGGCCGG CGCTCGACGT CTGGCCGATC
CTGCTGATGG TGTCGGTGCT CGTGTGCGTC GTGATCGTGA GCCTCGCGGT GGTGTCGTTC
CTCAGGGTCT ACATCGGCGG CGAGAGCACG TGGTCGAAGT CGCAGAAGGA CGCGGTCATC
TACCTGATCC GCTATGCGGA GACGGGCGAC GAGCGCGCGT ACAAGCTCTA TGAGGCCGCG
ATCGACAAGC CGTATCGGCT GAGTCTCGCG CGCGCCGCGC TGCAGCGCAA GCCGCCCGAT
CGCGCGAGCG CGCGCGAGGC GATCATCGCG AGCGGCATCG ATCCGACCGA CGCGACCGCG
GCCGCGCTGC TGCTGCCCGC GCTCAGCTGG GTCGCGAAGA TCAACTATGC GCTGCAATGC
TGGATGCAGG CGGACGTCGA GCTCGCCGAG TTCCGCAGCG TCGCGAGCCA GCTTCATGCG
CTCGTCAGCA GCGGCCATCG CGACGACGCC CGCGTGAAGG CGCTCGAATA CCGCGCGTGG
GAAATCAACG AACGCGTGTC CGGCCTGCCC GATCGCTTCT CGAAGGCGTT CAGCGACGAA
TTCCGTTCGA GCGTCGCGCT GCTGCTCGTC TGCTACTTCG TCGCGTCGAT GTTCCTGATG
TATCTCGCGC TCGTCTGGGC GCGCAAGGCC GCGCTGCAGC GGCTGTCGAT CCAGTACGCG
CTCGATCGCA GCGAGGCGTT CGCCGAGGCG GCGCTGAGCT CGGTCGCGGA GGCGGTGATC
ACGGTCGGGC TCGCGAAGAA CGTCGACTTC ATCAACAACG CGGCCGAGCA GCTGCTCGGC
TACCCGGCCG CCGCGTGCGT CGGCGCGCCG GTGTCGAGCG TGCTGATGCT GCTCGACAAG
GAGACGGGGC ACGCGGTCGA CATCGTCGAC GAATTCTGGG CGCGCGAGGA GCGCACGCCG
ATCAAGCGCG AGGTGCATCT GCTGCGCCGC GATCATTCGA AGATCGTTGT GCAGACAACG
ATTTCGGAGA TGGGCGACCG CGTGCACGGG CACATCGGCT ACGTGCTGAT CCTGCGCAAC
ATGACGCGCG AGCAGCAGTT CCTCGAAAGC CTCGCGTGGC AGGCGACGCA CGACGTGCTG
ACGGGGCTCG TGAACCGCGT CGAGTTCGAG CGCCGGCTCG AGATCGCGCT TGCCGACACG
GCCTCCGGCA AGGAGCGCGC CGATTCGATG CTGCTGATGC TCGATCTCGA CCGCTTCAAG
GAGATCAACG ACACCTGCGG CCACGCGGCG GGCGACGCGA TGCTGCGCGA AGTCACGCAG
CGCTTCCAGA GCTGCCTCGA CGACGACGAC GTGCTCGCGC GGCTCGGCGG CGACGAGTTC
GGCGTGCTGC TGCCGCACGG CGCGGGATCG TGGCCTTCGA AGAACAAGGC GGAGCGGCTG
CGCCGCAGCC TCGAGGATTT CGTGTTCCTG TGGGAGGGCG AGCGCTTCAC GGTGAGCGTG
AGCATCGGCG TGCTCGAGCT CTGCAAGGCG CCGCGCAATC TGGAGATGGC CGTCAAGCTC
GCCGACATCG CGTGCTACAT CGCGAAGGAG CGCGGGCGCA ACCGCATCCA GCTCGCGGAC
CCGAGCGATC TGCAACAGGC GCGCCACGTC GGCGACGTGC AATGGAGCCG CCGGATCAAG
ACCGCGCTCG AAAACGACGG CTTTCGCCTG TACGTGCAGC CGATCGTCCA TACGCGCCCG
GATTCGCGGA CGCCCGAGCG CGCGGAGGTG CTGCTGCGCA TGATGGACAG CGCGGGCCGC
GACATCTCGC CCGCCGCGTT CCTGCCGGCC GCCGAGCGCT ACGGGCTGAT GGGGCTCATC
GACCGCTGGG TGATCCGCAC GGTGTTCCGC AAGCTGAGCG CGCTACCCGC GCGCGAGTAC
CACGAGTACA ACGTGAATCT GTCGGGGGCG TCGATCTCCG ACGAGCGCTT TCTCGAATTC
GTGATCGCCG AGCTGCTGAG CTCCGGTCTC GAGCCTTCGG TGATCTGTTT CGAGATCACC
GAGACGATCG CCGTGAAGAA CCTCGAGCTC GCGTCGCGCT TCATGGGCGA GCTGCGCACG
ATCGGCTGCC GCTTCGCGCT CGACGATTTC GGCGCGGGCA TGTCGTCGTT TCGCTATCTG
CGCAGCCTGC CGATCGATTA TCTGAAGATC GACGGCGAGT TCGTGTCGAA CATGATGTCG
GACCGGGTGA GTTACGGCGT CGTCAGCGCG ATCAACGAAG TCGCGCACTC GATGCGTTGC
AGCACCGTCG CCGAGCATGT CGAGTCCGAG GTCGAGCTCG CGATGCTGCG CGAGCTCGGC
ATCGATTTCT GCCAGGGATA TTTCTTTGCT CAGCCTTCGC CGTGGCGCGA GGGCGGCTAT
TGA
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| Protein sequence | MNDGGGQAAE LRPALDVWPI LLMVSVLVCV VIVSLAVVSF LRVYIGGEST WSKSQKDAVI
YLIRYAETGD ERAYKLYEAA IDKPYRLSLA RAALQRKPPD RASAREAIIA SGIDPTDATA
AALLLPALSW VAKINYALQC WMQADVELAE FRSVASQLHA LVSSGHRDDA RVKALEYRAW
EINERVSGLP DRFSKAFSDE FRSSVALLLV CYFVASMFLM YLALVWARKA ALQRLSIQYA
LDRSEAFAEA ALSSVAEAVI TVGLAKNVDF INNAAEQLLG YPAAACVGAP VSSVLMLLDK
ETGHAVDIVD EFWAREERTP IKREVHLLRR DHSKIVVQTT ISEMGDRVHG HIGYVLILRN
MTREQQFLES LAWQATHDVL TGLVNRVEFE RRLEIALADT ASGKERADSM LLMLDLDRFK
EINDTCGHAA GDAMLREVTQ RFQSCLDDDD VLARLGGDEF GVLLPHGAGS WPSKNKAERL
RRSLEDFVFL WEGERFTVSV SIGVLELCKA PRNLEMAVKL ADIACYIAKE RGRNRIQLAD
PSDLQQARHV GDVQWSRRIK TALENDGFRL YVQPIVHTRP DSRTPERAEV LLRMMDSAGR
DISPAAFLPA AERYGLMGLI DRWVIRTVFR KLSALPAREY HEYNVNLSGA SISDERFLEF
VIAELLSSGL EPSVICFEIT ETIAVKNLEL ASRFMGELRT IGCRFALDDF GAGMSSFRYL
RSLPIDYLKI DGEFVSNMMS DRVSYGVVSA INEVAHSMRC STVAEHVESE VELAMLRELG
IDFCQGYFFA QPSPWREGGY
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