| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1395 |
|---|
| Symbol | sdhB |
|---|
| ID | 3692985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | - |
|---|
| Start bp | 1705463 |
|---|
| End bp | 1706170 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637731650 |
|---|
| Product | succinate dehydrogenase iron-sulfur subunit |
|---|
| Protein accession | YP_336553 |
|---|
| Protein GI | 76819207 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
|---|
| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.431084 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACA CCCGCATTCT CGACATCTAC CGCTACGATC CGGACGACGG GCGCGCGCCG
CGCATGCAGC GCTATGAGCT CGCGCCGCGC GCGGAAGACC GGATGCTGCT CGACGTGCTC
GGCCGCGTGA AGGCGCAGGA CGAGACGCTG TCGTATCGCC GCTCGTGCCG CGAGGGCGTG
TGCGGCTCCG ACGCGATGAA CATCAACGGC CGCAACGGGC TCGCCTGCGT GACGAGCATG
CAGGCGCTGC CGCGCGAAAT CGTGCTGCGG CCGCTGCCGG GGCTGCCCGT CGTGCGCGAT
CTGATCGTCG ACATGACGAG CTTCTTCAAT CAGTACCATT CGGTCCGCCC GTATCTCGTC
AACGAAGGCG TGCCGCCCGA ACGAGAGCGC CTGCAGACGC CGCAAGAGCG CGAGCAGCTC
GACGGCCTCT ACGAATGCAT CCTGTGCGCG TGCTGCTCGA GCGCATGCCC GAGCTACTGG
TGGAATCCCG ACAAGTTCGT CGGGCCGGCG GGGCTGCTGC AGGCGTACCG CTTCATCGTC
GATTCGCGCG ACGACGCGAG CGCCGCGCGC CTCGACGATC TCGAGGACCC GTACCGGCTG
TTCCGCTGCC GGACCATCAT GAACTGTGTC GATGTCTGTC CGAAAGGCCT GAACCCGGCG
CGCGCGATCG GACAGATCCG CACGATGCTC GCGCGGCGCG CGGTATAG
|
|---|
| Protein sequence | MADTRILDIY RYDPDDGRAP RMQRYELAPR AEDRMLLDVL GRVKAQDETL SYRRSCREGV
CGSDAMNING RNGLACVTSM QALPREIVLR PLPGLPVVRD LIVDMTSFFN QYHSVRPYLV
NEGVPPERER LQTPQEREQL DGLYECILCA CCSSACPSYW WNPDKFVGPA GLLQAYRFIV
DSRDDASAAR LDDLEDPYRL FRCRTIMNCV DVCPKGLNPA RAIGQIRTML ARRAV
|
|---|
| |