| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1348 |
|---|
| Symbol | |
|---|
| ID | 3692129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | + |
|---|
| Start bp | 1659146 |
|---|
| End bp | 1660042 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637731602 |
|---|
| Product | DNA mismatch endonuclease |
|---|
| Protein accession | YP_336505 |
|---|
| Protein GI | 76819542 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3546] Mn-containing catalase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.30931 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTTTC ACAACAAACG CCTGCAATAC ACGGTGCGCG TCGCCGAGAC GAATCCCGGC
CTCGCGAACC TGCTGCTCGA GCAGTTCGGC GGGCCGCAGG GCGAGCTCGC GGCCGCGATG
CGCTATTTCA CGCAAGCGAT CGCCGAAGAG GACGCGGGCC GCAAGGACAT GCTGTACGAC
ATCGCGACCG AGGAGCTGAG CCACCTGGAG ATCATCGGCT CGATCGTCGC GATGCTCAAC
CGCGGCGCGA AGGGCGAGCT CGCGGAGGCG GTCGACGAGC AGGCGCAGCT GTATCGCAAG
CTGAACGGCG GCGGCAACGA CAGCCACGTC ACGCAGTTGC TGTACGGCGC GGGCGCGCCG
CTCGTCAATT CGGGCGCGGT GCCGTGGACG GCCGCGTACG TCGACACGAT CGGCGAGCCG
ACCGCCGACC TGCGCTCGAA CATCGCGGCC GAGGCGCGCG CGAAGATCAT CTACGAGCGG
CTCATCAACG TCACGGACGA TCCCGGCATC CGCGACGCGC TCGGCTTTCT GATGACGCGC
GAGGTCTCGC ACCAGAAATC GTTCGAGAAG GCGCTGTATT CGATCACGCC GAACTTCCCG
CCGGGCAAGC TGCCGGCCGT GCCCGAATAC GCGGATCTCT ACTACGCGAT GTCGGACGGC
GGCGGCGCGC GGCGCAAGTC TCCATGGAAC GACGGCCACG ATCTGCGGCT CGTCGAGCAT
CCGCCCGTGC CGGCCGACGG CGGGGACGGC AAGGCCACGG TCGCGCTCGA CGGCGACGAA
AGCACGACGC TCGAGGCGAT GCGGCACCGG CTGAAATCGG ACCCGTCGTC GGACCCGACG
ACGGGCGCCG ATCTGGGCTC GGGCGGCCCG GACAAGCCGC GCGATTTTCC GACGTAG
|
|---|
| Protein sequence | MFFHNKRLQY TVRVAETNPG LANLLLEQFG GPQGELAAAM RYFTQAIAEE DAGRKDMLYD
IATEELSHLE IIGSIVAMLN RGAKGELAEA VDEQAQLYRK LNGGGNDSHV TQLLYGAGAP
LVNSGAVPWT AAYVDTIGEP TADLRSNIAA EARAKIIYER LINVTDDPGI RDALGFLMTR
EVSHQKSFEK ALYSITPNFP PGKLPAVPEY ADLYYAMSDG GGARRKSPWN DGHDLRLVEH
PPVPADGGDG KATVALDGDE STTLEAMRHR LKSDPSSDPT TGADLGSGGP DKPRDFPT
|
|---|
| |