| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1335 |
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| Symbol | |
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| ID | 3694285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | - |
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| Start bp | 1647681 |
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| End bp | 1650623 |
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| Gene Length | 2943 bp |
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| Protein Length | 980 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637731589 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_336492 |
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| Protein GI | 76817871 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase
[COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02778] DNA polymerase LigD, polymerase domain
[TIGR02779] DNA polymerase LigD, ligase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCGGCC GCGGGCTGCG TGACAGCGGC GGCAAGCACG AGCAATGGCT GCTGATCAAG
GAACGCGACG GCGACGCGCG CGACCAAGCG GACTACGACG TGCTGCGCGC ACGGCCGGGC
AGCGTGCTCG GCGGCGCGCG GTCCGCGCGG GCGAGGCGCG GGCGCGCGGC CGAGCCGACG
GAGCGCGACG CCGCCGCGCC GAAGCGGGCG CGCGCTTCAG TGCCGAAAGG GCGCGCCGAA
GCGAAGACGA GCGGGCGTGC GCCGCGCACC GTGTCGAACG GGACTGCGGG CGCGGGTAAG
GGCGCAAGCA AGCGTGCAAG CAAGCGCGAG GGCACGAATA CCGGAAACGG CGCGAGAAGC
GGCAAGGGCA GCGGCAAGGG CGCGGGCGAG GGCGTGGCCA CATCGCGCCG CAAACGCGCC
GCCGCGCCGC AGTCGTCCGA CGTCGATTCG GCCGATACCG ATTCACCCGC GGCGCGCGGC
CTCGCGTTGC CCGCCGGGCT TGCCGCGCGC TTCGGCCTGA GCGGCGCGAA GCGCGCGGCG
CTGCCGCGCA CGTTGCGGCC GCAACTGGCG ACGCTCGTCG ACACGCCGAC GCCCGGCAAA
GACTGGCTAT ACGAAGCGAA GTTCGATGGC TACCGCGTGC TGATCCGGAT CGATCGCGGC
GCGGCGTCCC GCCCGATTGC CGTCTACACG CGCGAGGGGC TCGACTGGAG CGCGAAATTC
GCCGCGCAGC TCGACGCGCT CGCGCGCCTG CCGGTCGACC GGGGCTGGCT CGACGGCGAG
GCGGTCGTGC TCGATCGCGC GGGCGTGCCG GATTTCCAGG CGCTGCAGAA CGCGCTCGGC
GCCGGACGCT CGAACGATGT CACGCTGTTC CTGTTCGACG TGCCGTTCCT GAACGGCTTC
GACCTGCGCG GCGTGCCGCT CGAACGGCGG CGCGCGCTGC TCGCCGCGCT CGTCGCCGCG
CATGCGAGCG ACGTGCTGCG CTACTCGGAG AGCCTCGCGT TCGAGGCCGC CGATCTGCTG
ACGGGCGCGT GCGACGCGGG GCTCGAAGGG CTGATCGGCA AGCGGCGCGA TGGCCGGTAC
GTCGAGGGGC GCTCGAGATC GTGGATCAAG CTGAAGTGCC GGCGCAGGCA GGAGTTCGTG
ATTGGCGGCT ACACGGAGCC GGCCGGACGG CGCAGCGGAT TCGGCGCGTT GCTGCTCGGC
GTGTACGCCC GGGCGCCGGG CGACGAGGGC GAACGAAGGA CGCGCGGCGC GGCCGAAACG
CGCGACGAGC GGCGTCGTGC ATCCCACGCA TCCCGCACAT CCCGCACATC CCGCACATCC
CGCACATCCC GCACATCCCG CGCGCCCGAT GCCGGCGCGG CGCGCGCACC GCAGGCGCGG
CCGCTCGCGT TGCGCTACGT CGGCCGCGTC GGCACCGGCT TCGGCGAGCG CACGCTTCGC
GCGCTCGCGC GGACGCTGCG CGAGCACGAG ACCGGGCGGA TGCCGTTCGC GGACGTGCCG
CGCGAGCGCA GCGGCACGCC GGTTCACTGG GTGAAGCCCG TGCTCGTCGC CGAATGCGAA
TTCGCGGAAT GGACGGGCGA CGGCATCGTC CGGCAGGCGT CGTTCGTCGG GCTGCGCGAA
GACAAGCCGG CGCGCACGAT CGTTCGCGAG CAACCGCAAT CCATGGAGAC GGAAGCCATG
AATGAACACG CTGACGAACA TACGGATGAA CATACCGATG CACGCGCCGA ACGTCGCACC
GGCGGACGCA CGCGGCGCAA AGCACGTGAC GACGGCGCGC GCGACGCGCC GGCGCTTGCC
CGCCATCCAA AGCGCGGCGA TGCGGGATCG TCCGCGCGCA AGGGCGCGCG GGACGGGGAG
GCGGGCAAGC GCGCCGCCGC GGGATCGTCG CCTTCGTCTT CACCGTCGAG TTCGACTTCG
ACTTCGCCTT CGATTTCGGC GTCAGGGCGC ACGCGCGGGG GCGGTCGTTC CGCCTCGCGC
GATCGAGCCG GCGATGCGGA CGAAGGCGCG AACGAAGACG CGAACGATCA CGCGCCGCGC
GAGCGCGCCG GCGCGCCGAA GGTGGCGGGC GTGCGCGTCT CGCATCCCGG CCGCGTGATC
GATCCGCACA CGGGCACGCG CAAGCTCGAC CTCGTCGAAT ACTGGGAATG GATCGCGCCG
TGGCTGCTGC CGCATCTGAA GGGCCGGCCG GTGTCGCTCG TGCGCGCGCC CGCCGACATC
GGCGGCGAGC TGTTCTTCCA GAAGCACGCG GACAAGCTGG AGATTCCGAA CGTCGCGCTG
CACCCGGGGC TCGATCCGGG CCATGAGGCG CTCATCACGA TCGACGATGT GAAGGGGCTC
GTCGGCGCCG CGCAAATGGG CACGATCGAG CTGCACACGT GGAACGCGCA CGTGTCGAAC
ATCGAGAAGC CGGACCGCGC GGTGTTCGAC CTCGACCCGG ACCCGTCGCT CGACTGGCGC
GCGGTGATCG AGGCCGCGCA GCTCACGCGC GCGCTGCTGG ACGAGCTCGG CCTCGTGTCG
TTCTGCAAGA CGAGCGGCGG CAAGGGGCTG CACGTCGTCG TGCCGCTCGC GCGCCATGCG
GGCTGGGACG ATGTGAAGGC GTTCGCGCAC GCGGTGGCGC GGCACATGGC GGCGACCCTG
CCCGAGCGCT TCACCGCGAC GATGGGGCCG CGCAACCGGA AGGGCAAGAT CTTCGTCGAC
TATCTGCGCA ACAACCGCGG CGCGAGCACG ATCGCCGCGT ACTCGGTGCG CGCGAGGCCG
GGGCTTGGCG TATCGGTGCC GATCGCATGG GACGAACTGC CGGATACGAC GGGCGCCGCG
CAATGGACGC TCGCGAACCT GCACGAGCGT CTCGACGCGC TGAAGCACGA CCCGTGGCGC
GCCTATGCGC ATGTGCGGCA ACGCGTGACG GCGGCGTTGC GGAAGCGGCT GAGCGATGGG
TAG
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| Protein sequence | MRGRGLRDSG GKHEQWLLIK ERDGDARDQA DYDVLRARPG SVLGGARSAR ARRGRAAEPT
ERDAAAPKRA RASVPKGRAE AKTSGRAPRT VSNGTAGAGK GASKRASKRE GTNTGNGARS
GKGSGKGAGE GVATSRRKRA AAPQSSDVDS ADTDSPAARG LALPAGLAAR FGLSGAKRAA
LPRTLRPQLA TLVDTPTPGK DWLYEAKFDG YRVLIRIDRG AASRPIAVYT REGLDWSAKF
AAQLDALARL PVDRGWLDGE AVVLDRAGVP DFQALQNALG AGRSNDVTLF LFDVPFLNGF
DLRGVPLERR RALLAALVAA HASDVLRYSE SLAFEAADLL TGACDAGLEG LIGKRRDGRY
VEGRSRSWIK LKCRRRQEFV IGGYTEPAGR RSGFGALLLG VYARAPGDEG ERRTRGAAET
RDERRRASHA SRTSRTSRTS RTSRTSRAPD AGAARAPQAR PLALRYVGRV GTGFGERTLR
ALARTLREHE TGRMPFADVP RERSGTPVHW VKPVLVAECE FAEWTGDGIV RQASFVGLRE
DKPARTIVRE QPQSMETEAM NEHADEHTDE HTDARAERRT GGRTRRKARD DGARDAPALA
RHPKRGDAGS SARKGARDGE AGKRAAAGSS PSSSPSSSTS TSPSISASGR TRGGGRSASR
DRAGDADEGA NEDANDHAPR ERAGAPKVAG VRVSHPGRVI DPHTGTRKLD LVEYWEWIAP
WLLPHLKGRP VSLVRAPADI GGELFFQKHA DKLEIPNVAL HPGLDPGHEA LITIDDVKGL
VGAAQMGTIE LHTWNAHVSN IEKPDRAVFD LDPDPSLDWR AVIEAAQLTR ALLDELGLVS
FCKTSGGKGL HVVVPLARHA GWDDVKAFAH AVARHMAATL PERFTATMGP RNRKGKIFVD
YLRNNRGAST IAAYSVRARP GLGVSVPIAW DELPDTTGAA QWTLANLHER LDALKHDPWR
AYAHVRQRVT AALRKRLSDG
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