Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1294 |
Symbol | cstA |
ID | 3693592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | - |
Start bp | 1603545 |
End bp | 1605623 |
Gene Length | 2079 bp |
Protein Length | 692 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637731548 |
Product | carbon starvation protein A |
Protein accession | YP_336451 |
Protein GI | 76819055 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.712641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCGGG CTTCCGGTTA TTTGGTCTGG ATCGCGGTCG CGCTGCTCGG CGCGTTCGCG TTCGGCACGA TCGCGCTCGC GCACGGCGAG CGGATCAGCG CGCTATGGAT CGTGATCGCC GCCGTTTGCG TGTATTTGAT CGCGTACCGC TTCTACAGCC GCTTCATCGC GAGCAAGGTC GTCCAGCTCG ACGGCCTGCG CATGACGCCC GCCGTCAAGT ACAACGACGG CCTCGATTAC GTGCCGACCA ACAAATACGT GCTGTTCGGC CATCATTTCG CCGCGATCGC CGGCGCGGGC CCGCTCGTCG GCCCGGTGCT CGCCGCGCAG ATGGGCTACA CGCCCGGCAT GCTGTGGATT CTCGCGGGCG TCGTGTTCGC GGGCGCGGTG CAGGACTTCA TCGTGCTGTT CATCTCGACG CGCCGCGACG GCCGCTCGCT CGGCGACCTC GTCAAGATGG AGCTCGGCAC GGTGCCCGGC GTGATCGCGC TGTTCGGGGC GTTCCTGATC ATGGTGATCA TTCTCGCGGT GCTCGCGCTG ATCGTCGTGA AGGCGCTCGC CAATTCGCCG TGGGGCACGT TCACCGTCGC CGCGACGATT CCGATCGCGC TGTTCATGGG CGTCTACACG CGCTACATCC GGCCGGGCCG GATCGGCGAA GTGTCGATCA TCGGCTTCGT GCTGCTGATG GCGTCGATCG CGTACGGCCA GCACGTGCAC GATTCGGCCG CGCTCGCCGC GTGGTTCACG TTCAGCGGCA CGCAGCTCAC GTGGATCCTG ATCGGTTACG GCTTCGTCGC GTCGGTGCTG CCGGTGTGGC TGCTGCTCGC GCCGCGCGAC TACCTGTCGA CGTTCCTGAA GATCGGCACG ATCGTCGGCC TCGCGATCGG CATCCTGATC GTCGCGCCGG AGCTGAAGAT GCCGGCGCTC ACGAAGTTCG TCGACGGCAC GGGCCCGGTC TGGTCGGGCA ACCTGTTCCC GTTCCTGTTC ATCACGATCG CGTGCGGCGC GGTGTCGGGC TTCCATTCGC TGATCTCGTC GGGCACGACG CCGAAGCTGC TCGACAACGA AACCAACGCG CGCTTCATCG GCTATGGCGC GATGCTGATG GAATCGTTCG TCGCGATCAT GGCGCTCGTC GCCGCGTGCG TGATCGAGCC GGGCGTCTAC TTCGCGATGA ACGCGCCGGC CGCCGTGCTC GGCACGACGC CGGAAGCGGT CGCGCACACC GTCACGCAGT GGGGCTTCAT GCTGACGCCC GACATGCTCA CGCAGACGGC GAAGGCCGTC GGCGAGACGA CGATCATCGC GCGCGCCGGC GGCGCGCCGA CGCTCGCGGT CGGCATGGCG CAGATCCTGC ACCAGGTGAT CGGCGGCGAG GCGATGATGG CGTTCTGGTA TCACTTCGCG ATCCTGTTCG AGGCGCTGTT CATCCTGACC GCGGTCGACG CGGGCACGCG CGCGGGCCGC TTCATGCTGC AGGATTTGCT CGGCACGTTC CACCCGGCGC TCAAGCGCAC CGAATCGCTG CCGGCGAACC TGACCGCGAC CGCGCTGTGC GTGGCCGCGT GGGGTTACTT CCTGTATCAG GGCGTGGTCG ATCCGCTCGG CGGCATCAAT ACGCTGTGGC CGCTGTTCGG CATCTCGAAC CAGATGCTCG CCGCGATCGC GCTGGTGCTC GGCACCGTCG TGCTGTTCAA GATGAAGCGC GAGCGCTACG CGTGGGTGAC GATCGTGCCG ACGGCGTGGC TGCTGATCTG CACGCTGACG GCCGGCTGGC AGAAGGTGTT CGATTCGAAT CCGAAGGTGA GCTTCCTCGC GCACGCGGCG AAGCTGCAGG CGGCCGCGGC CGACGGCAAG GTGCTCGCGC CGGCGAAGTC GCTCGCGCAG ATGCAGCGGA TCATCTTCAA CGACTACGTG GACGCGGCGC TCTCGGCGCT GTTCATCCTG GTCGTCGTGA GCATCGCGGT GTACGGCGTG GTTGCGGTCG TGCGCGCGCG GCGCGCGGTG CAGCCCACGT CGCGCGAAAC GCCGTACGAA CCGATGCCGG TCGCGCAGGC GCTCGGCAGC GGACGCTGA
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Protein sequence | MNRASGYLVW IAVALLGAFA FGTIALAHGE RISALWIVIA AVCVYLIAYR FYSRFIASKV VQLDGLRMTP AVKYNDGLDY VPTNKYVLFG HHFAAIAGAG PLVGPVLAAQ MGYTPGMLWI LAGVVFAGAV QDFIVLFIST RRDGRSLGDL VKMELGTVPG VIALFGAFLI MVIILAVLAL IVVKALANSP WGTFTVAATI PIALFMGVYT RYIRPGRIGE VSIIGFVLLM ASIAYGQHVH DSAALAAWFT FSGTQLTWIL IGYGFVASVL PVWLLLAPRD YLSTFLKIGT IVGLAIGILI VAPELKMPAL TKFVDGTGPV WSGNLFPFLF ITIACGAVSG FHSLISSGTT PKLLDNETNA RFIGYGAMLM ESFVAIMALV AACVIEPGVY FAMNAPAAVL GTTPEAVAHT VTQWGFMLTP DMLTQTAKAV GETTIIARAG GAPTLAVGMA QILHQVIGGE AMMAFWYHFA ILFEALFILT AVDAGTRAGR FMLQDLLGTF HPALKRTESL PANLTATALC VAAWGYFLYQ GVVDPLGGIN TLWPLFGISN QMLAAIALVL GTVVLFKMKR ERYAWVTIVP TAWLLICTLT AGWQKVFDSN PKVSFLAHAA KLQAAAADGK VLAPAKSLAQ MQRIIFNDYV DAALSALFIL VVVSIAVYGV VAVVRARRAV QPTSRETPYE PMPVAQALGS GR
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