Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1278 |
Symbol | rarD |
ID | 3693692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | - |
Start bp | 1591094 |
End bp | 1591987 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637731532 |
Product | rarD protein |
Protein accession | YP_336435 |
Protein GI | 76819450 |
COG category | [R] General function prediction only |
COG ID | [COG2962] Predicted permeases |
TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACGGGCG CGGGCGATGA TCCGCAGGCG GCGCGCGGGA TCGCGCTGTC GGTCGCGGCA TCGGCGCTGT TCGCGCTGCT GTCCGCGTAT GCGAAGCTGC TCGCGCCGCT GACGGGCCTC GACATTTTCG CGTGGCGGAT CATATGGACC GCGCCCGGCG CGCTCGCGGT CGTCGCGCTG CGCGGCCGCT GGCCCGCGTT GCGCGAGCTG CTCGCGCGCG CGTTCGCGAG CCGGCGGCTC GCGCTGTCGC TCGCGGCGAG CGCGGGGCTG CTCGGCCTGC AGCTCTGGCT GTTCCTGTGG GCGCCGCTGC ACGGCCGGAT GCTCGAAGTG TCGCTCGGCT ATTTCCTGCT GCCGCTGACG ATGGTGCTCG TCGGGCGCTT CCACTATCAC GAACGCCTGA GCGCGCTGCA ATGGCTGGCG CTCGCGTGCG CGGCGGCGGG CGTCGCGCAC GAAATTTGGG CGACGCGCGC GTTCGCCTGG CCGACGCTCG TCGTCGCGCT CGGCTATCCG CCTTACTTCG TGTTGAGACG CCGCGTGAAC GCTGATTCGC TTGCGCTGTT CTCGGTCGAG ATGCTCGCGC TGCTGCCCAT TGCGGCCGCG ATGCTCGCGG CGGGCGGCAC GAGCGTCGCC GGCCGGCCGC TGTTGTGGGC GATGCTGCTG CCGGGGCTCG GCGCGATCAG CACGCTCGCG CTCGCGAGCT ATCTGAAGGC GAGCCGCATG CTGCCGATGG CGCTCTTCGG GATTCTCGGC TACGTCGAGC CGGTGCTGCT CGTCGCGGTG GCCGTGCTCG TGCTCGGCGA GGCGCTGTCG TGGCAGCAGC TCGCGACGTA TGCGCCGATC TGGGCGGCCG TCGCGCTGAC CGCGTGGCAC GGTTTTCTGA TCGCGCGGCG ATAG
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Protein sequence | MTGAGDDPQA ARGIALSVAA SALFALLSAY AKLLAPLTGL DIFAWRIIWT APGALAVVAL RGRWPALREL LARAFASRRL ALSLAASAGL LGLQLWLFLW APLHGRMLEV SLGYFLLPLT MVLVGRFHYH ERLSALQWLA LACAAAGVAH EIWATRAFAW PTLVVALGYP PYFVLRRRVN ADSLALFSVE MLALLPIAAA MLAAGGTSVA GRPLLWAMLL PGLGAISTLA LASYLKASRM LPMALFGILG YVEPVLLVAV AVLVLGEALS WQQLATYAPI WAAVALTAWH GFLIARR
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