| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1266 |
|---|
| Symbol | |
|---|
| ID | 3694022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | - |
|---|
| Start bp | 1578740 |
|---|
| End bp | 1580170 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637731520 |
|---|
| Product | MFS family transporter |
|---|
| Protein accession | YP_336423 |
|---|
| Protein GI | 76817743 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGG ACCGAAGCGA AACCCTGACC GATGCGCACG GCGGCGCGCC GAGCAAGAGC
GAGCGCACGC CGCCGCGCGC GCTCGTGCTG CCGATCGTGC TCGGCACGCT GCTCAACGCG
CTGAATTCGT CGATGATCGC GGTCGCGCTC GTCGACATCC GGCGCGCGTT TTCCGGCGGC
GGCGAGGTTG ACGTGATGTG GCTCGTGTCC GGCCTCTATC TCGCGACCGC GGTCGGCCAG
CCGATGATGG GCCGGCTCGC GGATGGCTTC GGCGCGAAGC GGGTCTTCCT CGTCGGGCTC
GCGATCGTGC TGGCCGCCGC CGCGCTCGCG CCGTGGGCGC CGTCGCTCGG CTGGCTCGTC
GCCGCACGCG TGATGCTCGG GATCGGCACG TCGGCCGCGT ATCCGGCCGG CATCGCGATG
ATCCGCGCGT GGTCGCAGCG CCATGCGCGG GGCGAGACGC CGACGAGCAG CCTCGGCGCG
ATCTCGATCG CCGCGCAGGT GGCCGTCGCG TTCGGCCCGC CGCTCGGCGG CCTGCTCGTT
CAGTACGCCG GCTGGCGCGG CGTGTTCTGG ATCAACGTGC CGCTCGTCAT CGTCGCGTTC
GTGCTCGGCG CGGCGCGGCT GCCGGCCGAC GCCCCGCGCG CGGCGCCGCG CCGCCCGAGC
CTGCGCGAGC AGGACTGGCT CGGCGCCGCG CTGTTCGTCG CGACGCTCGC GAGCCTGCTG
TCGTTCCTGC AAACCGCGTT CGAGGCGCCC GACTGGCCGC TGCTCGGCGC ATGCGCCGCG
TTCGGCGCGC TGCTCGTCGG CCACGAGCGC CGTGTCGGCG AGCCGCTCGT CGACGTCCGG
ATGCTGGCCG GCAACCGCCC GCTCGTCGCG ACGTATCTGC GCTGCATCGG CACATACATG
GTGTTCTACG CGATCTTCTA TGCGCTGCCG ATGTGGCTGC AGGACGTCAA GGGCCTCGCC
GCGCGCGACG CGGGGCTCGT GATGCTGCCG ATCTCCGCGT TCGGCACGGT CACGACGCTC
GTCGCGACGC GGCTCACGCA TCGCCGCGGA TCGCGCCCGG TGCTGGTGTT CGGCTCCGCG
ATGCTGTGCG TCGGCTGCGG CGTGATGGCG CTGATGTCGG CCGACATGCC GGTATGGGCG
ATCGTCCCGC TGTCGATCGT GTTCGGGATT CCGAATGGTT TCAACAATCT CGGCAATCAG
GCGACGCTCT ATCGAAGCGC GCCGGGCGAG CGCATCGGCG CGGCGGCGGG CCTCTACCGG
ACCGCGCAAT ACGTCGGCGG CGGCTTGTCG TTCGCGCTCG TGGGCATCGC GTTCGGCCAC
GCGGCGAGCG ATCGCGGGCT GCATGCGCTC GCGCTCTCGC TGCTCGCCGT GAGCGCGCTG
CTGCTGTTCA ACGCGGCATC GAGCCGGCAC ATCGACGCCG CCGGTGCCTA A
|
|---|
| Protein sequence | MKLDRSETLT DAHGGAPSKS ERTPPRALVL PIVLGTLLNA LNSSMIAVAL VDIRRAFSGG
GEVDVMWLVS GLYLATAVGQ PMMGRLADGF GAKRVFLVGL AIVLAAAALA PWAPSLGWLV
AARVMLGIGT SAAYPAGIAM IRAWSQRHAR GETPTSSLGA ISIAAQVAVA FGPPLGGLLV
QYAGWRGVFW INVPLVIVAF VLGAARLPAD APRAAPRRPS LREQDWLGAA LFVATLASLL
SFLQTAFEAP DWPLLGACAA FGALLVGHER RVGEPLVDVR MLAGNRPLVA TYLRCIGTYM
VFYAIFYALP MWLQDVKGLA ARDAGLVMLP ISAFGTVTTL VATRLTHRRG SRPVLVFGSA
MLCVGCGVMA LMSADMPVWA IVPLSIVFGI PNGFNNLGNQ ATLYRSAPGE RIGAAAGLYR
TAQYVGGGLS FALVGIAFGH AASDRGLHAL ALSLLAVSAL LLFNAASSRH IDAAGA
|
|---|
| |