Gene BURPS1710b_A1257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A1257 
Symbol 
ID3693824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp1568977 
End bp1570599 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content74% 
IMG OID637731511 
Producthypothetical protein 
Protein accessionYP_336414 
Protein GI76817239 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4632] Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACGCTCA CCCTCGCGAG CTGCGGCGGT GACGATCTGA CGCCCGCCGC GCAGCGCTGG 
GCGATGCCCG GCACCGAACT GCCGCTCGGG CCGCAGGGCC TCGCGCAGAG CGTGTCGACG
CAGACGCTCG CCGCAGGCGT CGCCTATTAC CAGATCAAGC GCGGCGCGGC GAGCGCGGCC
GATTTCTGGA CCGTCAACCT CGGCTTCTAC GCGACGCAAG CCGCGGCGCA GGCCGATGCG
GCGAATCTCG CGGCGGCCGG CTTCGCGACG CGCGTCGACG CGTCGGCGGG CACCGACCTG
CAGGGCAAGG TGCTCGGCTA CTGGCTGTCG GCCGGCCGCT ACGCGACGCA GGCCGAGGCG
ACGGCGGCCG CCGCGCGCAT CGCGCAGGCC ACGCAGAACC GCTACAAGCC GGGCACGCGG
CATACGTCGC TCGCCGGCGC GCCGACGACG GGGCCGTGGA TCGTCAACGT GCTCGCGATC
GACCCGTCGC GCGCCGGCGC GGCGCTGTCG CTCGCGCTGC CGGGCGGCGA CGATCTCGGT
GCGGGCGGCG AGACGGTTTC GGCCGCGCGG GCGCGTGTGA ACGCGCTCGC CGGCGTCAAC
GGCGGCTTTT TCACGAACAT CAATCCGTTC GGCGCGCCGC TGCCGCCGCG CTCGCCCGTC
GGCGCGACGG TAGTCGACGG GCGGCTCGTC GCGGCAGCGA TCGGCAGGCG CCCCGGCCTG
CTGCTCGCGC GCGACGCGAA CGGCCGCCAA CGCGCGACGG TCGTGCGCAA TCTCGCGACG
TCGATCACGC TGACCGACGC GCAAGGCCGT GCGATCGCGG TCCAGACGCT GAACCGGCCG
ATCCTCGGCA CGGTCGTCAA TTGCGGCGCG CAGGCGCGCA CGCCGACGAG CGAGCCGGCG
CAGGACACGG TGTGCACGAA CTACGATGAC CTCGTGATGT ACGACTCGCT ATATCTGCGC
GGCGGTGCGT CGAACACGCT CGTCGACGCC AGCTACCAGG GCGCGCGATA CGAACTCGTG
GTCGACGCGA ACGGCGCCGT CGTCGCCGGC CATGCGACGC TCGGCGCGCC GCCGCCGCCG
AACGGCTACG TGCTGCAGGG GCTCGGCGCG AGCGCCGCGT GGCTGCAGGC GCATGCGACG
CCGGGCACGC GCCTCGCGGT ATCGCGCCGG CTGTCGGCCG ACGGCGCGGA TCTCGCGCTC
GCGTCGGGCA TGTCGCTCGT CGAGGCGGGG CCGACGCTGT CCGTGCCGAA TCTCGCGCAA
AGCGCCGCGC AAGAGGGCTT CGCGCCGACG GTGGGCGGCG TCGACGCGGG CGAAGGCGCC
GCGGCGAACG GCAACTGGTA CAACGGCTGG TATGTCGCGC GCAATGGGCG CACCGCGGCG
GGCGTCGCGG CGGACGGCAC GATCCTGCTC GTCGAGATCG ACGGCCGGCA GCCCGCGTTG
AGCGTCGGCA CGAGCATTCC GGAGACGGCG GCGGTGATGG CATGGCTCGG TGCGACGTCG
GCCGTCAATC TCGACGGCGG CGGCTCGAGC AACATGGTGG TCGGCGGCAA GATGGTCGGA
CATCCGTCCG ACGCCGTGGG CGAGCGGGGC GTCGGCGATA CGCTGATGCT GCTGCCGGGC
TGA
 
Protein sequence
MTLTLASCGG DDLTPAAQRW AMPGTELPLG PQGLAQSVST QTLAAGVAYY QIKRGAASAA 
DFWTVNLGFY ATQAAAQADA ANLAAAGFAT RVDASAGTDL QGKVLGYWLS AGRYATQAEA
TAAAARIAQA TQNRYKPGTR HTSLAGAPTT GPWIVNVLAI DPSRAGAALS LALPGGDDLG
AGGETVSAAR ARVNALAGVN GGFFTNINPF GAPLPPRSPV GATVVDGRLV AAAIGRRPGL
LLARDANGRQ RATVVRNLAT SITLTDAQGR AIAVQTLNRP ILGTVVNCGA QARTPTSEPA
QDTVCTNYDD LVMYDSLYLR GGASNTLVDA SYQGARYELV VDANGAVVAG HATLGAPPPP
NGYVLQGLGA SAAWLQAHAT PGTRLAVSRR LSADGADLAL ASGMSLVEAG PTLSVPNLAQ
SAAQEGFAPT VGGVDAGEGA AANGNWYNGW YVARNGRTAA GVAADGTILL VEIDGRQPAL
SVGTSIPETA AVMAWLGATS AVNLDGGGSS NMVVGGKMVG HPSDAVGERG VGDTLMLLPG