Gene BURPS1710b_A1226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A1226 
Symbol 
ID3693929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp1537859 
End bp1539193 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content68% 
IMG OID637731480 
Productmajor facilitator family transporter 
Protein accessionYP_336383 
Protein GI76817825 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.278518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAACCC CGACGCCCGG CACGCCCCGC CCTCCCCGCA CGCCCCAACC CGTGCGCGCC 
GCGCTGGCCG CCTTCATCGG CACCACCGTC GAGTTCTACG ATTACTACAC GTACGCCACC
GCCGCCGCGC TCGTGCTCGG CGACGTGTTC TTCCCGAGCG ACAACCCTTT CGTCAGCACG
ATGGCATCGT TCGCCACGTT CTTCGTCGGC TTCGTCGCGC GCCCACTGAG CGGTGCGGTG
TTCGGCCATC TCGGCGACCG GATCGGCCGC AAGAAAATGC TCGTCCTGAC GATGTTCCTG
ATGGGCGCCG CGACAACCGG CATCGGCCTG CTGCCCGGCT ACGCGACGAT CGGCGTCTGG
GCCCCCGTCC TGCTCGTGCT GCTGCGCATC CTCCAGGGCA TCGCCGTCGG CGGCGAATGG
GGCGGCGCGG TGCTGATGGC AAGCGAGCAC GCGAGCGCCG GGCGCAGGAC GCTCTTCGCG
TCGTTTCCGC AAATGGGCAG CCCCGCCGGG CTGATCCTCT CGCTGCTCGC GTTCCGCTAC
GTCACGTCGC TCGATCACGC CCGCTTCGTC GCGTGGGGCT GGCGCCTGCC GTTTCTCGCA
AGCTTCGTGC TGTTGCTGAT CGGCGTCGCG GTACGGCTCG GCGTCAACGA ATCGCCGGAG
TTCGAGCGCG TGCGCGACAG CCACGCGGTC GCCCGATTTC CGGTCGCCGA AGTGCTGCGC
ACCGCGTGGT ATCCGATCGT GCTCGCCGCG GCCGCGACGA CGATCGGCTC CGCCGGCTTC
TTCTTCACGA ACACGTTCAT GATCTCGTAC GTGACGACGT ATCTCGGGAT GTCGAAATCG
TTCATCCTCG ATTGCCTGTT CGCCGTCACG CTCATCCAGT TGCTGTCGCA GCCCGTCTCG
GCGCTGCTCG CGCAACGTTT CGGCGAAACG CGTTTCCTCG TCTGCGCGGC GCTGCTGTCG
ATGCTCACGC CGTATCCGAT GTTCGTGCTC GTGCGCACGC ACGATCCGGT TGCGATCGTC
GCGGGCATCG CGTTCGCGGT CGTCGCGCTC TCCGCCGTCT ACGCGGTGAT CGCCGGCTTC
ATGTCCGCCG CGTTCCCCAC GCGCGTGCGC TATTCGGGCA TCTCGATCGC CTACCAGCTA
TGCGCGCTAG TCGCGGGCGG CACCACGCCG CTCGTCGGCA CGATGATCGC GCAGCGCTAT
CGCGGAGAAT GGCTGCCGCT CGCGCTGTTC TTCTCGCTGC TGGCGTTCGT GTCGCTCGTC
GGCATCGTGG GGCTCGGGCG GTATCGCCGG AATCTGCACG CGGCCGCGCC GCGGGCATGG
GCGGTGAATC CGTGA
 
Protein sequence
MPTPTPGTPR PPRTPQPVRA ALAAFIGTTV EFYDYYTYAT AAALVLGDVF FPSDNPFVST 
MASFATFFVG FVARPLSGAV FGHLGDRIGR KKMLVLTMFL MGAATTGIGL LPGYATIGVW
APVLLVLLRI LQGIAVGGEW GGAVLMASEH ASAGRRTLFA SFPQMGSPAG LILSLLAFRY
VTSLDHARFV AWGWRLPFLA SFVLLLIGVA VRLGVNESPE FERVRDSHAV ARFPVAEVLR
TAWYPIVLAA AATTIGSAGF FFTNTFMISY VTTYLGMSKS FILDCLFAVT LIQLLSQPVS
ALLAQRFGET RFLVCAALLS MLTPYPMFVL VRTHDPVAIV AGIAFAVVAL SAVYAVIAGF
MSAAFPTRVR YSGISIAYQL CALVAGGTTP LVGTMIAQRY RGEWLPLALF FSLLAFVSLV
GIVGLGRYRR NLHAAAPRAW AVNP