Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1226 |
Symbol | |
ID | 3693929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 1537859 |
End bp | 1539193 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637731480 |
Product | major facilitator family transporter |
Protein accession | YP_336383 |
Protein GI | 76817825 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.278518 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAACCC CGACGCCCGG CACGCCCCGC CCTCCCCGCA CGCCCCAACC CGTGCGCGCC GCGCTGGCCG CCTTCATCGG CACCACCGTC GAGTTCTACG ATTACTACAC GTACGCCACC GCCGCCGCGC TCGTGCTCGG CGACGTGTTC TTCCCGAGCG ACAACCCTTT CGTCAGCACG ATGGCATCGT TCGCCACGTT CTTCGTCGGC TTCGTCGCGC GCCCACTGAG CGGTGCGGTG TTCGGCCATC TCGGCGACCG GATCGGCCGC AAGAAAATGC TCGTCCTGAC GATGTTCCTG ATGGGCGCCG CGACAACCGG CATCGGCCTG CTGCCCGGCT ACGCGACGAT CGGCGTCTGG GCCCCCGTCC TGCTCGTGCT GCTGCGCATC CTCCAGGGCA TCGCCGTCGG CGGCGAATGG GGCGGCGCGG TGCTGATGGC AAGCGAGCAC GCGAGCGCCG GGCGCAGGAC GCTCTTCGCG TCGTTTCCGC AAATGGGCAG CCCCGCCGGG CTGATCCTCT CGCTGCTCGC GTTCCGCTAC GTCACGTCGC TCGATCACGC CCGCTTCGTC GCGTGGGGCT GGCGCCTGCC GTTTCTCGCA AGCTTCGTGC TGTTGCTGAT CGGCGTCGCG GTACGGCTCG GCGTCAACGA ATCGCCGGAG TTCGAGCGCG TGCGCGACAG CCACGCGGTC GCCCGATTTC CGGTCGCCGA AGTGCTGCGC ACCGCGTGGT ATCCGATCGT GCTCGCCGCG GCCGCGACGA CGATCGGCTC CGCCGGCTTC TTCTTCACGA ACACGTTCAT GATCTCGTAC GTGACGACGT ATCTCGGGAT GTCGAAATCG TTCATCCTCG ATTGCCTGTT CGCCGTCACG CTCATCCAGT TGCTGTCGCA GCCCGTCTCG GCGCTGCTCG CGCAACGTTT CGGCGAAACG CGTTTCCTCG TCTGCGCGGC GCTGCTGTCG ATGCTCACGC CGTATCCGAT GTTCGTGCTC GTGCGCACGC ACGATCCGGT TGCGATCGTC GCGGGCATCG CGTTCGCGGT CGTCGCGCTC TCCGCCGTCT ACGCGGTGAT CGCCGGCTTC ATGTCCGCCG CGTTCCCCAC GCGCGTGCGC TATTCGGGCA TCTCGATCGC CTACCAGCTA TGCGCGCTAG TCGCGGGCGG CACCACGCCG CTCGTCGGCA CGATGATCGC GCAGCGCTAT CGCGGAGAAT GGCTGCCGCT CGCGCTGTTC TTCTCGCTGC TGGCGTTCGT GTCGCTCGTC GGCATCGTGG GGCTCGGGCG GTATCGCCGG AATCTGCACG CGGCCGCGCC GCGGGCATGG GCGGTGAATC CGTGA
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Protein sequence | MPTPTPGTPR PPRTPQPVRA ALAAFIGTTV EFYDYYTYAT AAALVLGDVF FPSDNPFVST MASFATFFVG FVARPLSGAV FGHLGDRIGR KKMLVLTMFL MGAATTGIGL LPGYATIGVW APVLLVLLRI LQGIAVGGEW GGAVLMASEH ASAGRRTLFA SFPQMGSPAG LILSLLAFRY VTSLDHARFV AWGWRLPFLA SFVLLLIGVA VRLGVNESPE FERVRDSHAV ARFPVAEVLR TAWYPIVLAA AATTIGSAGF FFTNTFMISY VTTYLGMSKS FILDCLFAVT LIQLLSQPVS ALLAQRFGET RFLVCAALLS MLTPYPMFVL VRTHDPVAIV AGIAFAVVAL SAVYAVIAGF MSAAFPTRVR YSGISIAYQL CALVAGGTTP LVGTMIAQRY RGEWLPLALF FSLLAFVSLV GIVGLGRYRR NLHAAAPRAW AVNP
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