Gene BURPS1710b_A1197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A1197 
Symbol 
ID3694397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp1504657 
End bp1505217 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content73% 
IMG OID637731451 
Producthypothetical protein 
Protein accessionYP_336354 
Protein GI76818158 
COG category[S] Function unknown 
COG ID[COG3518] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03357] type VI secretion system lysozyme-related protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGACG ACGTGCGAGC CGCGGGCGGC GGAGCGGGCG GCGTGCGCGC CGCGCATGAC 
CGGCTGCAGC CGGCGCTGCT CGACCGGCTG ACCGACGCCG AGCGCGAGCG GCGCACCGAG
CCGCCCGACG CGCAGGCGAT CGGCGGCGAG CGCCTGCGCG CGGCGGTGCT GCGCGATCTG
GCGTGGCTGC TCAACACGCG CAACGGCGAG GACGGCTTCG TCGACTGGTC GGCGTTCGCG
CACGCGCAGG CGTCGGTGCT CAACTACGGG ATGCGGCCGC TCGTCGGCAA GCCGATGTCG
GGCGTCGAGC GGATGTCGGT CGAGGCGTCG ATCCGCGATG CGATCGTGCG TTTCGAGCCG
CGTATCGCGC CCGACAGCGT CGAGGTGCGC AGCGTGCTCG ACGCGCCGGG CGGCGCGGCG
GGCGAGCGCC GGCACAACGT GCTGATGTTC GAGATCAAGG GCACGCTGTG GTCGATTCCG
CATCCGGTCG AGTTCGTGCT GCGCTCGGAC CTCGATCTGG AGACGGGCGC GATGGCGCTG
CACCCGGCGG CGGGAGGCTG A
 
Protein sequence
MNDDVRAAGG GAGGVRAAHD RLQPALLDRL TDAERERRTE PPDAQAIGGE RLRAAVLRDL 
AWLLNTRNGE DGFVDWSAFA HAQASVLNYG MRPLVGKPMS GVERMSVEAS IRDAIVRFEP
RIAPDSVEVR SVLDAPGGAA GERRHNVLMF EIKGTLWSIP HPVEFVLRSD LDLETGAMAL
HPAAGG