| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1176 |
|---|
| Symbol | tnpC |
|---|
| ID | 3693565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | - |
|---|
| Start bp | 1477582 |
|---|
| End bp | 1478070 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637731430 |
|---|
| Product | TnpC protein |
|---|
| Protein accession | YP_336333 |
|---|
| Protein GI | 76818384 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.969692 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGG CAAACGCCTA TCCGGACGAC GTCGAAGCGC TCAAGGCCAT GCTGCTTGAG
CGCGATGCAC GCATTGGGCA TCTGGAAGAC GTGGTCGAAT CGCACAAGGC GGCGAACGCC
ACCGCCAAGG CCGAGATCGA GCATCTGAAG CTGCTGATCG CGAAACTGCG CCGCATGCAG
TTCGGCCGGA GCTCCGAGAA GCTCGACCGT CAGATCGAGC AGCTCGAGTT GCGACTGGAA
GAGCTCGAGG CCGACGAAGG CGCCGCCCCC ATCGAGATTC CGAAGACGCC GCGTACCGCA
CCGGAACAAG CGCCCCGCAA ACCGCTCCCC GAGCATCTGC CCCGCGAGAT CCTGACGTAC
TGGCCGGAAT CGGGCGAAAC CTGCGCGGCG TACCTGACCG TGCTGCCGCC GCGCGAGACA
TTGCAGGCAA AGTTGCATCA ATCGATTGCG GCGGCCCGTG CACGGCTTGA TGATCAGCGG
GAGCCGTGA
|
|---|
| Protein sequence | MTTANAYPDD VEALKAMLLE RDARIGHLED VVESHKAANA TAKAEIEHLK LLIAKLRRMQ
FGRSSEKLDR QIEQLELRLE ELEADEGAAP IEIPKTPRTA PEQAPRKPLP EHLPREILTY
WPESGETCAA YLTVLPPRET LQAKLHQSIA AARARLDDQR EP
|
|---|
| |