| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1169 |
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| Symbol | fhaC |
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| ID | 3693646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | - |
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| Start bp | 1455159 |
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| End bp | 1456919 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637731423 |
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| Product | outer membrane hemolysin activator protein |
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| Protein accession | YP_336326 |
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| Protein GI | 76818603 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.640849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACGA CCAGACGGCT GGCGGTTTTA CCAATCACTA CTCTGTTCAC GCTTGCTGCG
CAAGCACAAC AGGCGCCGTC TCCCAGTGAC CAGGCCGCCG CTGCCCGCGC GAACGCCGAG
CAGAATCAGC AAGCTCAGCA GCGCCGTGAC GCCCAGCAGC GCGACGCCAC CGTGCAAGCG
CCGGGCGTGC GCTCGGACGT GCCGCGCCCG GAAGCCTATC CGGTACTGCC GACCGAAACA
CCGTGCTTTC AAATCGACCG CTTCGCGCTC GACGTGCCCG ACTCATTACC GGCTGCGTCA
AAGGCGCAAG GCGCGTCAGC CTTGCCGATG GATCGCTTCG CCTTTGCACG CGACTGGCTT
GCGCACTACG CCGGCCAATG CATCGGTAAG CAAGGCGTCG ACCTGATCGT TAAGGGGCTG
TCGCAAGCCA TCCTCGCTCG CGGCTACATC ACGACCCGCG TACTCGTGCC CGAGCAGGAT
TTGTCCACTG GCGCGTTGAA GCTTGCCCTG ATTCCGGGCG TGATCCGCCA CGTGCGTTTC
GAGGACGAGA AGTTGCGCGG AACGTGGAAG ACCGCTTTCC CGACGCGCGA CGGCGACGTG
TTGAACCTGC GTGACATTGA GCAAGGGCTT GAGCAGATGA AGCGCGTGTC AAGCCAGGAT
GTGTCCATGC GGATCGCACC GGGTGACATG CCCGGCGAAA GCGATGTCGT GCTCGACGTG
AAGCGCGGCA AGCCGTGGAC GGTCGTCGCG TCGATCGACA ATTCCGGCAC GCGCGCGACC
GGCAAACTGC AGGGCAACGT ATCGCTTGGC ATCGACAACC CGCTGGGCCT GAACGACATT
TTCAACGTCG GCTTCAACCA GGATCTGGAA TTCGGCGATA AGCGCTTCGG TTCGCACGGC
TGGAACGCGT TCTATTCGAT TCCCTGGGGC TACTGGACCG GCACGCTTTC GGCGTATACC
AGCACGTACT TTCAACCGCT CGCGGCCGTG AATCAGACGT TTGTTGCCAG TGGCAACATG
AAGACGGTCG ACTTCAGGCT CAATCGTGTG CTGACGCGCA GCCGGAACGA TGTGTTGGGC
GCGCAGGTTC GCTTGACGCG GCGCTTCGGC GACAGCTACA TCGAAGGCAC GACGATACCG
TCGTCGCACC AGAACGCGAC CTTTCTCGAA TTCGGGTTGA ACGACCGGCA CTATTTCGGC
TCGTCGCAGT TCGATGGCTC GCTTGCCTAT CGTCAGGGGC TCGGCTGGCT CGGCTCGACC
GACAGCATGT TCGCGGCAGA GGGAGGGCAG ACGTACCGAT TCAAGATGGT CGTGCTCGAT
GCGAACCTGT CGACGCCGTT CGTCATCGGC ACGCAGCCGT TCAAATACGT GACGACCTTT
CATGGTCAGT ACACCGGCAA CACGGTTTCA TATCTCGATA GCGTGACGAT CGGCAGCCGT
TATACCGTGC GGGGATTCGA CGGTGAAACG CTGCTGGCGG GATCGCGCGG GTTTTACTGG
CGCAACGAAT TGCAGGTCCC CGTCGCGCAG ACCGGGCTAT CGGCCTATGC CGGTCTCGAC
TACGGTCGGG TCTGGGGACC GGAGCCGGTC GCGCTGGTCG GCACGCAGCT CGCGGGCGCA
GTGATTGGCG TCAAGGGCAG CTTGATGACG CGCTTCGGCG GGTATGGCTA CGACCTGTTC
GCCGGCACAC CCGTCTACAA ACCGTCCGGG TTTCCCACCG CGCGCGTGAC GGTGGGCTTT
CAGCTCACGG CGCAATTCTG A
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| Protein sequence | MKTTRRLAVL PITTLFTLAA QAQQAPSPSD QAAAARANAE QNQQAQQRRD AQQRDATVQA
PGVRSDVPRP EAYPVLPTET PCFQIDRFAL DVPDSLPAAS KAQGASALPM DRFAFARDWL
AHYAGQCIGK QGVDLIVKGL SQAILARGYI TTRVLVPEQD LSTGALKLAL IPGVIRHVRF
EDEKLRGTWK TAFPTRDGDV LNLRDIEQGL EQMKRVSSQD VSMRIAPGDM PGESDVVLDV
KRGKPWTVVA SIDNSGTRAT GKLQGNVSLG IDNPLGLNDI FNVGFNQDLE FGDKRFGSHG
WNAFYSIPWG YWTGTLSAYT STYFQPLAAV NQTFVASGNM KTVDFRLNRV LTRSRNDVLG
AQVRLTRRFG DSYIEGTTIP SSHQNATFLE FGLNDRHYFG SSQFDGSLAY RQGLGWLGST
DSMFAAEGGQ TYRFKMVVLD ANLSTPFVIG TQPFKYVTTF HGQYTGNTVS YLDSVTIGSR
YTVRGFDGET LLAGSRGFYW RNELQVPVAQ TGLSAYAGLD YGRVWGPEPV ALVGTQLAGA
VIGVKGSLMT RFGGYGYDLF AGTPVYKPSG FPTARVTVGF QLTAQF
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