| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1077 |
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| Symbol | |
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| ID | 3693369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 1344514 |
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| End bp | 1346100 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637731331 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_336235 |
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| Protein GI | 76818246 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.918636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCGGC GTCCGCACCC AGCGGCGGCC TCGATCCGGC CGCCCGACAG GCTTTCCGAC
GTCATGCGCA AGCGTACGAC CTCCTTTGCG ACTCGTTTCC TGCAGCCCTG GACGCAGAGC
CTGATGTCGC CGACGGGCGT AATCGTTTGC GGCATGCTGC TGCTCACGCT GATCTGGCTG
TTTTGCGCAC GCGTGCTGTA CCAGTCGCAC CGGGACGCAT ACCTGCATGC GGTCGACAAC
GCACACAATC TCGTGCTGCT GCTCGAACGC GACATCGCGC GCAACGTCGA GCTCTACGAC
CTGTCGCTGC AGGCGGTCGT CGACGGCGTG AACGATCCGC GCATCATGGC GCTCGATCCC
GCGATACGCG CCAAGGTGCT GTTCGACCGC GCGGCCACCG GCAAGTACCT CGGCACGATC
TCCGTGATGA ACGAGCACGG CGACATCGTG CTCGACTCGC ACTTCCCGCA TCCGCCTGCC
GTCGCGAACT TCTCGTATCG CGACTATTTC GTCTACCAGC GCGATCACCC GAAAGGCGGC
CTCTACATCG GCGAGCCGTA CGCGGCGCGG CTGCGCCACG GCGCGCCGAC GATCGCGCTC
AGCCGGCGCA TCACGCGCGC CGACGGCTCG TTCGGCGGCG TCGTCGTCGG CACGCTCGGC
ATCGACTACT TCCGCTCGCT GCTCGACGGT CTTTCGGTGG GCCCGGACGG CACGGCGGCC
GTCTTCGAGA CCAACGGGCT GATGATCACG CGCCTGCCGT TCGATCCGAA GATGGTCGGA
CGCAGCATCG CCGACTCGGC CCTCTACGCG CACGTGCGCG AGCACGACGC GGGCGTGTTC
ACCGGCGTCG CGTCGATCGA TGGCGTGCGG CGGCTTTACG TGTACAAGCG GCTGCAGGGG
CTGCCGATCG TCGTCAACGT GTCGCCCGCC GAGCGGCACG TCTTCATGCA ATGGCGCATT
CGGGCGCAGC GGCTCGGCGT GCTGATGCTC GTGTTCGGCA TCGCGATCGT CGGCGGCACC
GCGCTGCTCG CGCGCGAGTT GCGCTGGCGG CGGCACGCGG AAATGCGCCT GCAGCGCCTC
GCCCGCACCG ATGCGCTGAC GGGCCTCGGC AATCGGCGCG CGTTCGACGA GAACCTGCGC
AGCGAATGGG CGCGCGCGCT GCGCACCGGC CGCCCGCTGT CGCTGCTGTT CGTCGACATC
GATCAGTTCA AGGACTACAA CGACCACTAC GGCCACCAGG CGGGCGACGA CGTGCTGCGC
GAAGTCGGCG GCTGCCTCGC GGTGAACGTA CGCCGCGCGG CCGACGACGT CGCGCGTTAC
GGCGGCGAGG AGTTCGTGAT CACGCTGCCG GACACCGACG CGAAAAGCGC GGCCGCGATC
GCCGAGTACA TCCGTCGCGC GGTCTACGAT CTCGACATCG AGCACGTGCG CAGCCCGTAT
GCGCGCGTGA CCGTCAGCAT CGGCCTCGTC ACGTCGCACG AGCACATCGC GCACTCGGAC
GCGACGCTCG TGAAGATGGC CGATGCCGCG CTGTACCAGG CGAAATCGAC CGGACGCAAC
CGCGTCTGCG GCGCGCAGCA CGCCTGA
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| Protein sequence | MKRRPHPAAA SIRPPDRLSD VMRKRTTSFA TRFLQPWTQS LMSPTGVIVC GMLLLTLIWL
FCARVLYQSH RDAYLHAVDN AHNLVLLLER DIARNVELYD LSLQAVVDGV NDPRIMALDP
AIRAKVLFDR AATGKYLGTI SVMNEHGDIV LDSHFPHPPA VANFSYRDYF VYQRDHPKGG
LYIGEPYAAR LRHGAPTIAL SRRITRADGS FGGVVVGTLG IDYFRSLLDG LSVGPDGTAA
VFETNGLMIT RLPFDPKMVG RSIADSALYA HVREHDAGVF TGVASIDGVR RLYVYKRLQG
LPIVVNVSPA ERHVFMQWRI RAQRLGVLML VFGIAIVGGT ALLARELRWR RHAEMRLQRL
ARTDALTGLG NRRAFDENLR SEWARALRTG RPLSLLFVDI DQFKDYNDHY GHQAGDDVLR
EVGGCLAVNV RRAADDVARY GGEEFVITLP DTDAKSAAAI AEYIRRAVYD LDIEHVRSPY
ARVTVSIGLV TSHEHIAHSD ATLVKMADAA LYQAKSTGRN RVCGAQHA
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