Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1056 |
Symbol | atpD |
ID | 3692373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | - |
Start bp | 1320720 |
End bp | 1322306 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637731310 |
Product | F0F1 ATP synthase subunit beta |
Protein accession | YP_336214 |
Protein GI | 76818109 |
COG category | [C] Energy production and conversion |
COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCGGATC CGCAGGCGAC GAACGGCACG GGCGCGGCGT GCGCGGAGCG CGACGCGAGC GACGTGGGCG ATGCGCGTGA CGAGGGCGCC GGCCGCGTCG TCGCGGTGCG CGGCGCGGTG ATCGACGTCG CGTTCGACGG CGGCGCGCTG CCCGCGCTGA ACGAAGCGCT CACGATCCCG GTCGACGGCG CCGCGCCGAT TCTCGCCGAG GTGCACGCAC ACCTGAGCGA CGCGGCGGTG CGCGCGCTCG CGCTCGGCCC GACGGGCGGC CTGCGGCGCG GCGCCGCCGT GCGCGCGACG GGCGGGCCGA TTCGCGTGCC TGTCGGCGAC GCGGTGCTCG GCCGCCTGCT GAGCGTGACG GGCGCGCCCG GCGACGACGG CGCGGCGCTT GCGGCGGACG TCGAGCGGCG GCCGATCCAT CGCGGCGCGC CGCTGCTCGC CGAGCAGAAG AGCGCGAACG CGCTGTTCGC GACCGGCATC AAGGTGATCG ATCTGCTCGC GCCGCTCGCG CAGGGCGGCA AGGCCGCGAT GTTCGGCGGC GCGGGCGTGG GCAAGACGGT GCTCGTGATG GAGTTGATCC ATGCGATGGT CGAGCGCTAT CGCGGGATCT CGGTGTTCGC GGGCATCGGC GAGCGCTCGC GCGAGGGGCA CGAGATGCTG CTCGACATGC GCGGCTCCGG CGTGCTCGGC CGCACGGTGC TCGTCTACGG GCAGATGAAC GAGCCGCCCG GCGCGCGCTG GCGCGTGCCG CTCACCGCGC TCGCGATCGC CGAGTATTTT CGCGACGAGC GCGCGCAGAA CGTGCTGCTG CTGATGGACA ACGTGTTTCG CTTCGTGCAG GCGGGCGCCG AGGTGTCGGG CCTGCTCGGG CGGCTGCCGT CGCGGGTCGG CTACCAGCCG ACGCTCGCGA GCGAGGTCGC GGCGCTGCAG GAGCGGATCG CCTCGGTCGA GGGCGCGGCG GTGACCGCGA TCGAGGCCGT CTACGTGCCC GCCGACGATT TCACCGATCC CGCCGTCACC GCGATCGCCG CGCACGTCGA CAGCATGGTC GTGCTGTCGC GCGCGATGGC GGCCGAAGGA ATGTATCCGG CGATCGATCC GGTCGCGTCG TCGTCGATCC TGCTCGATCC GCTCGTCGTC GGCGAAGCGC ACGTGGAGGT GGCCATCGAG GTGCGCCGCG TGATCGAGCA TTACCGCGAA TTGCAGGACG TGATCGCGTT GCTCGGCATC GATGAGCTCG GCGCGGACGA CCGGCGGCTC GTCGGCCGCG CGCGCCGGCT GCAGCGCTTT CTCACGCAGC CGTTCGCGGT GACCGAGGCG TTCACGGGGC AGGCGGGCGC GTCGGTCGAG ATCGCCGACA CGATCGCCGG TTGCCGCGCG ATCCTGCGCG GCGACTGCGA CGACTGGCGC GAGAGTTCGC TGTACATGGT CGGCACGCTC GACGACGCGC GGCGCAAGGA AGCGGCGGCG CGCGAAGCGG ACGCGCGCCG CGAGGCGGCT GCCGCGGCGT CGGGCGCGGG ACCGGGCACG ACATCCGACC CCGCATCCGG CTCCGCCGAG CCGCAAGGCG CGCGGCATGG GCGCTGA
|
Protein sequence | MADPQATNGT GAACAERDAS DVGDARDEGA GRVVAVRGAV IDVAFDGGAL PALNEALTIP VDGAAPILAE VHAHLSDAAV RALALGPTGG LRRGAAVRAT GGPIRVPVGD AVLGRLLSVT GAPGDDGAAL AADVERRPIH RGAPLLAEQK SANALFATGI KVIDLLAPLA QGGKAAMFGG AGVGKTVLVM ELIHAMVERY RGISVFAGIG ERSREGHEML LDMRGSGVLG RTVLVYGQMN EPPGARWRVP LTALAIAEYF RDERAQNVLL LMDNVFRFVQ AGAEVSGLLG RLPSRVGYQP TLASEVAALQ ERIASVEGAA VTAIEAVYVP ADDFTDPAVT AIAAHVDSMV VLSRAMAAEG MYPAIDPVAS SSILLDPLVV GEAHVEVAIE VRRVIEHYRE LQDVIALLGI DELGADDRRL VGRARRLQRF LTQPFAVTEA FTGQAGASVE IADTIAGCRA ILRGDCDDWR ESSLYMVGTL DDARRKEAAA READARREAA AAASGAGPGT TSDPASGSAE PQGARHGR
|
| |