Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A1038 |
Symbol | |
ID | 3692656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 1302699 |
End bp | 1303772 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637731292 |
Product | Type I antifreeze protein:HlyD family secretion protein |
Protein accession | YP_336196 |
Protein GI | 76819367 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCAAG TCACCAGGAA GCAGATCGTC GCCGCGGCGG CCGTCGTCGT GGTCGCGCTC GGCGCTTACT ACGGCTGGAC GCTGCTGCGC CACCAGGGCC CCGGCGACGG CTTCGCGAGC GGCAACGGCC GCATCGAGGC CACCGAGATC GACGTCGCGA CGAAGCTGCC CGGGCGCATC GATGCGATCC TCGTCGACGA GGGCGATTTC GTGAAGGCCG GCCAGCCGCT CGCGAACATG CAGATCCAGG TGCTGCGCGC GCAGTACGAC GAAGCGACCG CGCAGCGGCA GCGCGCGCTG AACACCGCGG CCGGCGTGCA ATCGCAGGTC GCGCAGCGCA AGAGCGACAA GGCGGCCGCG CAGGCGATGG TCGTGCTGCG CGAAAGCGAA CTCGACGCGG CCGAGCGCCG GCTCGCGCGC TCGCAAACGC TATCGCGCGA AGGCGCGTCG TCGCTGCAGG AGCTCGACGA CGATCGCGCG CGCGCGCGCA GCGCGCAGGC GGCCGTGTCC GCGGCGGCCG CGCAGGTGGC CGCCGCGCAG GCCGCGATCG AGGCGACCGA GGCGCAGCTC GTCGCCGCGC ATTCGGCGGT GACGGCGGCC GACGCCACCG TCGCCCGCGT GCAGGCCGAC ATCGACGACA GCCAGCTCGC ATCGCCGCGC GACGGCCGCG TGCAGTATCG CGTCGCGCAG CCGGGCGAAG TGCTGCCGGC GGGCGGCAAG GTGCTCAATC TCGTCGACCT GTCGGACGTC TACATGACGT TCTTCCTGCC GGAGACGGTC GTCGGCCGGG TCGCGCTCGG CGCCGACGCG CGCATCATCC TCGATGCCGC GCCGAACTAC GTGATTCCCG CCACCGTGTC GTTCGTGTCG AGCACCGCGC AGTTCACGCC GAAGACCGTC GAGACCGCGA ACGAACGGCA GAAGCTGATG TTCCGCGTGA AGGCGCGCAT CGATCGCGAG CTGCTGCAAA AGCACCTGAA GCTCGTGAAG ACCGGGCTGC CCGGCGTCGC GTGGGTGCGC GTCGACCCGA GCAAGCCGTG GCCCGCGCAA CTGATGGTCA AGGTTCCGCA GTGA
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Protein sequence | MIQVTRKQIV AAAAVVVVAL GAYYGWTLLR HQGPGDGFAS GNGRIEATEI DVATKLPGRI DAILVDEGDF VKAGQPLANM QIQVLRAQYD EATAQRQRAL NTAAGVQSQV AQRKSDKAAA QAMVVLRESE LDAAERRLAR SQTLSREGAS SLQELDDDRA RARSAQAAVS AAAAQVAAAQ AAIEATEAQL VAAHSAVTAA DATVARVQAD IDDSQLASPR DGRVQYRVAQ PGEVLPAGGK VLNLVDLSDV YMTFFLPETV VGRVALGADA RIILDAAPNY VIPATVSFVS STAQFTPKTV ETANERQKLM FRVKARIDRE LLQKHLKLVK TGLPGVAWVR VDPSKPWPAQ LMVKVPQ
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