Gene BURPS1710b_A1030 details

Gene Information

• Locus tag: BURPS1710b_A1030
• ID: 3694329
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007435
• Strand: +
• Start bp: 1292787
• End bp: 1294640
• Gene Length: 1854 bp
• Protein Length: 617 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637731284
• Product: polysaccharide deacetylase domain-containing protein
• Protein accession: YP_336188
• Protein GI: 76818012
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0726] Predicted xylanase/chitin deacetylase

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGTGCGA ATCCCATCAT CTCTCCTGAC CCGTATAACC GATCGCTCGT CGAACCCCGG 
AAGCGTCGGC GGTTTTTGTC GGCAGCCCTG AACGACGGGC CGTCGTGCCG TTCCTGGATA 
GCGGCAGCCT TCGCGCAAAC GTTTAGCGGT AAACGAACTT TTTTAATAAG GGTCGCCAGC 
GCATATCATG GAACCGATCC GCCCACGAGA AAAAAACCTC GAAAAACGCC GAGCGGCGCG 
GCATCTTCCT GGCGAGACGC CCTCGGCGAA TTCCGCTTCG CGCGGCGGCT CGCGCCGATC 
CGCGCGGCCA ACGCATGCCG GTTCGGCGTC TGTCGATCGA GTCAACGGGA ATGCCTCGCG 
CGCAACGAAA GACGAGAAAT CGATCAGGAT TCCGTTTCGA TTTCATCGCG CCATTTCGTT 
TCGCGCGCAT CGAATGGAAG ACGGCCGGCG GCGAACATTC GACCCGCGCC AAGCACGCGC 
TCGATCGCCG GCGCGCGCGT GCGCAATGCA TCGCGCGCAC CGAACGGAAC CGGCCGCCGA 
GGAAGATCGA GCGCGCGACG GCGCATGTCC GAACCCGCGG CACGTTCGCC GCCCGCCCGC 
GAAGCGGGCG ACGCCGGCCG CGCGAACGCC GCGGCACCGC GCCGCCGAGA GCGGCCCGCA 
TCGGCGATAT GCAACACACG AACGCGCGCC GGCTTGACGT ACATCAACGA TCGTGCGTGC 
GACGCCGCAC CGCAGCGGCG CCGTCCGCCT ATAGTGGCGC CCTGCACTGG TGCGGCTGCG 
TTGACTTGGC TCAACGCACG CGGGCATGCG CGGCGCATGC TAGTGCATAC ATGCTTCGCA 
TGCTGCTCAA GAGGCTCGCC AGCCCGTTCG TCCGACGCCG CCCGACAGGC ACGCCGATGT 
GCCGACAGCA CCGTGACGCG CGCGCCGGGA ACGACGCTCG CGGCCCGCCT CCGATCGCAG 
CCTGCGTGCA GCCGGCGCAA CGCCGGCCCC GACAACTCAG CGACGCACAC CATCATGTCA 
TTTCGTTCCC GGTTCACCTG GCGCACGGCC GTTTTCGGCC CCGGCTTTCG GCCCGTCTCG 
CGGATCGTCG CTACCACTGC GTCGAGCGGC GCGCCCGCCG TCGCCGCGCC GCCGACCGAC 
GTCGCCGTGC TCGTCTATCA CCGTTTCTCG AACGTCTGCG GCGCCGATCC GATGACGGTC 
GGCGTCGCGA CATTCGAAGC GCAACTCGCG CACCTGCGCC GGCTCGGCTA CCGGTTCGTC 
CCGCTACGCG ACGTGATCGG CTGGCTGCGC GGCGAGCCCG TCGCGCTGCC GTCGAAGGCG 
ATCGCGCTGA CGATCGACGA AGGGCACGCA TCGATCTTCG ACTGGGCCCG CACGGTCGCG 
CTGCGCGAGC GGGTGCCGAT CACGCTGTTC GTCTATCCGT CCGCGATCGG CGAGGCGCCC 
GGCGCGCTCA CGTGGCACCA GTTGCGCGTG CTGCACAAGA CCGGCTGGTT CGACGTGCAA 
TCGCACGCGT GGTGGCATCC CGATCTGAAC GCCGCGCACC GGCCGCCTTC CGGCGCGTTT 
CGCGAGGCGA CGCGCGCGCA GTTCGCGCAG GCGCGCGCAC GCATCGCGCG CGAGATCGGC 
AACCAGGTCG ATCTGCTCGC CTGGCCGTTC GGCGCGTTCG ACGGCGAACT CGGCGCGGCC 
GCGCGCGAAG CCGGCTACGT CGCGGGCTTC ACGCTCGAGC CGAGCAAGAT CCGGCGCGAC 
ACGCCGCTGC TCACGCTGCC GCGGTTCCTG ATGGTCGAGG AATGCACGCC GGCCGTGCTG 
CGGCGATTGC TCTCGAAGAG CGACGCGGCA CGCGAGGAAG CGGCGCGGCG CTGA 

 

Protein sequence

MCANPIISPD PYNRSLVEPR KRRRFLSAAL NDGPSCRSWI AAAFAQTFSG KRTFLIRVAS 
AYHGTDPPTR KKPRKTPSGA ASSWRDALGE FRFARRLAPI RAANACRFGV CRSSQRECLA 
RNERREIDQD SVSISSRHFV SRASNGRRPA ANIRPAPSTR SIAGARVRNA SRAPNGTGRR 
GRSSARRRMS EPAARSPPAR EAGDAGRANA AAPRRRERPA SAICNTRTRA GLTYINDRAC 
DAAPQRRRPP IVAPCTGAAA LTWLNARGHA RRMLVHTCFA CCSRGSPARS SDAARQARRC 
ADSTVTRAPG TTLAARLRSQ PACSRRNAGP DNSATHTIMS FRSRFTWRTA VFGPGFRPVS 
RIVATTASSG APAVAAPPTD VAVLVYHRFS NVCGADPMTV GVATFEAQLA HLRRLGYRFV 
PLRDVIGWLR GEPVALPSKA IALTIDEGHA SIFDWARTVA LRERVPITLF VYPSAIGEAP 
GALTWHQLRV LHKTGWFDVQ SHAWWHPDLN AAHRPPSGAF REATRAQFAQ ARARIAREIG 
NQVDLLAWPF GAFDGELGAA AREAGYVAGF TLEPSKIRRD TPLLTLPRFL MVEECTPAVL 
RRLLSKSDAA REEAARR