| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1002 |
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| Symbol | benD |
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| ID | 3693741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 1267321 |
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| End bp | 1268115 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637731256 |
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| Product | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase |
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| Protein accession | YP_336160 |
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| Protein GI | 76817354 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACTC ATCACGCACC CGGCCGCTTC AGCGGCAAGG TGACGATCGT CACGGGCGCC
GCGCAGGGCA TCGGCCGCGG CGTCGCGCGG CGCGCGGCGC GCGAAGGCGC GACGGCCGTG
CTCGTCGATC GCGCGGACCT CGTGCACGAG GCGGCGGCCG ATATCGTCAC GGCGGGCGGC
CGCGCACTCG CCGTCGTCGC CGATCTCGAA ACGTATGCGG GCGCCGAAGC GATGGCGCGC
GCGGCCGTCG ACGCGTTCGG CTCGATCGAC GTGCTCGTCA ACAACGTCGG CGGTACGATC
TGGACGAGGC CGTTCGACCG CTACGAAGCC GCGCAGATCG AAGCGGAGAT CCGCCGTTCG
CTGTTCCCGA CGCTGTGGTG CTGCCGCGCG GTGCTGCCCG GCATGATCGC GCGCGGCGGC
GGCGCGATCG TCAACGTATC GTCGATCGCG ACGCGCAGCG TTCATCGCGT GCCGTACGCG
GCCGCCAAAG GCGGCGTCAA CGCCCTGACC GCCAGCCTCG CGTTCGAGCA CGCCGCGCAC
GGCGTGCGCG TGAACGCGGT CGCCGCGGGC GGCACCGACG CGCCGCCGCG CAAGGTGCCG
CGCAACACGG AGCCGCAGGG CGACGACGAT GCGCGCTGGT ATCGCGCCAT CGTCGACCAG
ACGCTGTCGT CGAGCCTGAT GCACCGCTAC GGCACGATCG ACGAGCAGGT CGCCGCGATC
CTGTTTCTCG CGTCCGACGA GGCGTCGTAC ATCACCGGCT CGGTGCTGCC CGTCGGCGGC
GGCGATCAGG GCTGA
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| Protein sequence | MNTHHAPGRF SGKVTIVTGA AQGIGRGVAR RAAREGATAV LVDRADLVHE AAADIVTAGG
RALAVVADLE TYAGAEAMAR AAVDAFGSID VLVNNVGGTI WTRPFDRYEA AQIEAEIRRS
LFPTLWCCRA VLPGMIARGG GAIVNVSSIA TRSVHRVPYA AAKGGVNALT ASLAFEHAAH
GVRVNAVAAG GTDAPPRKVP RNTEPQGDDD ARWYRAIVDQ TLSSSLMHRY GTIDEQVAAI
LFLASDEASY ITGSVLPVGG GDQG
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