Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A0987 |
Symbol | catA |
ID | 3692620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 1251927 |
End bp | 1252829 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637731241 |
Product | catechol 1,2-dioxygenase |
Protein accession | YP_336145 |
Protein GI | 76818492 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
TIGRFAM ID | [TIGR02439] catechol 1,2-dioxygenase, proteobacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.337436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACAAGG AAGCCATCGA CGCCCTGCTG AAATCGTTCG ACGACGCCGC GACGCGGCCC GGCAACCCGC GCGTGCGCGC GATCGTCAAC CGGATCGTGA AGGACCTGTT CTACACGATC GAGGATTGCG ACGTGCAGCC GAGCGAATTC TGGACCGCGC TCAACTACCT GAACGATGCC GGCAAGGAAT TCGGCCTCAT CGCGGCTGGC CTCGGCTTCG AGCGCTTCCT CGACGTGCGG ATGGACGAAG CCGAAGCGAA GGCGGGCCTG CAGGGCGGCA CGCCGCGCAC GATCGAGGGG CCGCTGTACG TCGCGGGCGC GCCGGAGTCG GTCGGCCACG CGCGGCTCGA CGACGGCACC GATCCGGGCG AGACGCTCGT GATGCGCGGC CGCGTGCTCG GCGGCAACGG CGCGCCGCTT GCGAACGCGC TCGTCGAAGT CTGGCATGCG AACCATCTCG GCAATTATTC GTACTTCGAT CCGTCTCAGC CCGCGTTCAA CCTGCGCCGC TCGATCCGCA CCGACGCCGA AGGCCGCTAC AGCTTCCGCA GCGTGCTGCC CGTCGGCTAC AGCGTGCCGC CCGGCAGCAA GACCGAGCAA TTGCTCGACC AGCTCGGCCG CCACGGCCAC CGCCCCGCGC ACATCCACTT CTTCGTGTCG GCGCCCGGCC ATCGCAAGCT GACGACGCAG ATCAACATCG AGGGCGATCC GCACATCTGG GACGACTTCG CGTTCGCGAC GCGCGAGGGG CTGATTCCGA AGATCGCGCA GGCGGAAGGC GCGCAGGGCA AGCCGTACGG CATCGACGGC CGGTTCGCGC TGATCGACTT CGATTTCACG CTGACGCGCG AGCGCGGCGA CGTGCCGGCG AGCGAAGTCG AGCGCGTGCG CGCGCAAGCG TGA
|
Protein sequence | MNKEAIDALL KSFDDAATRP GNPRVRAIVN RIVKDLFYTI EDCDVQPSEF WTALNYLNDA GKEFGLIAAG LGFERFLDVR MDEAEAKAGL QGGTPRTIEG PLYVAGAPES VGHARLDDGT DPGETLVMRG RVLGGNGAPL ANALVEVWHA NHLGNYSYFD PSQPAFNLRR SIRTDAEGRY SFRSVLPVGY SVPPGSKTEQ LLDQLGRHGH RPAHIHFFVS APGHRKLTTQ INIEGDPHIW DDFAFATREG LIPKIAQAEG AQGKPYGIDG RFALIDFDFT LTRERGDVPA SEVERVRAQA
|
| |