Gene BURPS1710b_A0986 details

Gene Information

• Locus tag: BURPS1710b_A0986
• Symbol: catB
• ID: 3692310
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007435
• Strand: +
• Start bp: 1250759
• End bp: 1251892
• Gene Length: 1134 bp
• Protein Length: 377 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 637731240
• Product: muconate cycloisomerase
• Protein accession: YP_336144
• Protein GI: 76819331
• COG category: [M] Cell wall/membrane/envelope biogenesis; [R] General function prediction only
• COG ID: [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
• TIGRFAM ID: [TIGR02534] muconate and chloromuconate cycloisomerases

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.55882
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAGCAA CAGGCATCAC GATCGACCGG ATCGACACGC TGCTCGTCGA CGTGCCGACA 
GTCCGGCCGC ACAAGCTTTC GGTGGCGACG ATGAACTGCC AGACGCTCGT GCTCGTGCGC 
GTCCGATGCT CGGACGGTAT CGAGGGCGTC GGCGAAGGCA CGACGATCGG CGGTCTCGCG 
TACGGCGAAG AAAGCCCCGA GAGCATCAAG ACGAACATCG ACGCCTATTT CGCGCCGATG 
CTGCGAGGCG CGGACGCGAG CCGCCCGGGC GCCGCGATGG CGCGCGTGCG CAAGCTGCTC 
CAGGGCAACC GCTTCGCGAA GTGCGCGCTC GAGACCGCGC TGTTCGACGC GCACGCGCGC 
CGGCTCGGCG TGCCGCTGTC CGAATTGCTC GGCGGCAGGA CGACCGACGC GCTCGACGTC 
GCGTGGACGC TCGCGAGCGG CGACACCGCG CGCGACATCG CGGAGGCCGA GGCGATGCTC 
GAAGCGCGCC GCCATCGCGC GTTCAAGCTG AAGATCGGCG CGCGCGCGGT GGCCGACGAC 
GTCGCGCATG TCGTCGCGAT CAAGCGCGCG CTCGGCGAGC GCGGCGACGT GCGCGTCGAC 
GTGAACCAGG CATGGACCGA AAGCGAGGCC GTGTGGGCCG GCGCGCGGCT CGCGGACGCG 
GGCGTGAGCC TCGTCGAGCA GCCGATCGCC GCGGCCAATC GCGCGGGCCT GAAGCGCCTC 
ACCGCGCTCG CGCACATCCC GATCATGGCC GACGAGGCGC TGCACGGCCC CGTCGACGCA 
TTCGCGCTCG CGCGCGAGCG CGCGGCCGAC GTGTTCGCGG TGAAGATCGC GCAATCGGGC 
GGCCTGCAGG GCGCGGCCGC CGTCGCGGCG ATCGCCGCCG CGGCCGGCAT CGAACTGTAC 
GGCGGCACGA TGCTCGAAGG CGCGGCCGGC ACGATCGCGT CCGCGCAACT GTTCAGCACG 
TTCGGCGCGC TCGAGTGGGG CACCGAGCTG TTCGGCCCGC TGCTGCTGAC CGAGGAGATC 
CTCGTCGAGC CGCTGCGCTA CGAGGATTTC AAGCTGCACC TGCCGAGCGC CCCCGGCCTC 
GGCATCGCTT TCGACTGGGC CCGTATCGAG CGGATGCAAC GCCGGGCCCG CTGA 

 

Protein sequence

MIATGITIDR IDTLLVDVPT VRPHKLSVAT MNCQTLVLVR VRCSDGIEGV GEGTTIGGLA 
YGEESPESIK TNIDAYFAPM LRGADASRPG AAMARVRKLL QGNRFAKCAL ETALFDAHAR 
RLGVPLSELL GGRTTDALDV AWTLASGDTA RDIAEAEAML EARRHRAFKL KIGARAVADD 
VAHVVAIKRA LGERGDVRVD VNQAWTESEA VWAGARLADA GVSLVEQPIA AANRAGLKRL 
TALAHIPIMA DEALHGPVDA FALARERAAD VFAVKIAQSG GLQGAAAVAA IAAAAGIELY 
GGTMLEGAAG TIASAQLFST FGALEWGTEL FGPLLLTEEI LVEPLRYEDF KLHLPSAPGL 
GIAFDWARIE RMQRRAR