Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A0979 |
Symbol | hit |
ID | 3694185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | - |
Start bp | 1244505 |
End bp | 1244921 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637731233 |
Product | HIT family protein |
Protein accession | YP_336137 |
Protein GI | 76817848 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.721312 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCTACG ATCAATCGAA CATTTTTGCG AAGATCCTGC GCGGCGAGGT GCCGTGCATC CGTTTGTGCG AAACGGACAC GACGCTCGCG TTCATGGACA TCATGCCGCA ATCGAGGGGC CATGCGCTCG TCGTGCCGAA AGAGGCGGCG GAGACGTTCT ACGAGCTGTC CGAGGCGGCC GCGGCCGAAG CGATGAAGAT GACGAAGCGC GTCGCGCTCG CGCTGCGCCG CACGCTCGAG CCGGAAGGGC TCTTCATCGG CCAGTTCAAC GGCGCGGCGG CGGGCCAGAC GGTGCCGCAC GTGCACTTCC ACGTGATTCC GCGCTGGGCC GACGAGCCGC TCAAGATGCA TGCGCGCGAG ATGGCCGACG CGGCCGAGCT GGAGGCGCTC GCCGCGCGTA TCCGCACGGC GCTGTGA
|
Protein sequence | MAYDQSNIFA KILRGEVPCI RLCETDTTLA FMDIMPQSRG HALVVPKEAA ETFYELSEAA AAEAMKMTKR VALALRRTLE PEGLFIGQFN GAAAGQTVPH VHFHVIPRWA DEPLKMHARE MADAAELEAL AARIRTAL
|
| |