Gene BURPS1710b_A0979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A0979 
Symbolhit 
ID3694185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp1244505 
End bp1244921 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content67% 
IMG OID637731233 
ProductHIT family protein 
Protein accessionYP_336137 
Protein GI76817848 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.721312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTACG ATCAATCGAA CATTTTTGCG AAGATCCTGC GCGGCGAGGT GCCGTGCATC 
CGTTTGTGCG AAACGGACAC GACGCTCGCG TTCATGGACA TCATGCCGCA ATCGAGGGGC
CATGCGCTCG TCGTGCCGAA AGAGGCGGCG GAGACGTTCT ACGAGCTGTC CGAGGCGGCC
GCGGCCGAAG CGATGAAGAT GACGAAGCGC GTCGCGCTCG CGCTGCGCCG CACGCTCGAG
CCGGAAGGGC TCTTCATCGG CCAGTTCAAC GGCGCGGCGG CGGGCCAGAC GGTGCCGCAC
GTGCACTTCC ACGTGATTCC GCGCTGGGCC GACGAGCCGC TCAAGATGCA TGCGCGCGAG
ATGGCCGACG CGGCCGAGCT GGAGGCGCTC GCCGCGCGTA TCCGCACGGC GCTGTGA
 
Protein sequence
MAYDQSNIFA KILRGEVPCI RLCETDTTLA FMDIMPQSRG HALVVPKEAA ETFYELSEAA 
AAEAMKMTKR VALALRRTLE PEGLFIGQFN GAAAGQTVPH VHFHVIPRWA DEPLKMHARE
MADAAELEAL AARIRTAL