| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0975 |
|---|
| Symbol | |
|---|
| ID | 3693763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | - |
|---|
| Start bp | 1239016 |
|---|
| End bp | 1240596 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637731229 |
|---|
| Product | Na+/H+ antiporter |
|---|
| Protein accession | YP_336133 |
|---|
| Protein GI | 76817513 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
|---|
| TIGRFAM ID | [TIGR00831] Na+/H+ antiporter, bacterial form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.525449 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCCGG TCTCGGCATT CAAGCTCGTT TTGCTGTCCT TTCTCGCGAT CGTCGCGCTC
GAGCTGCTCG CGAAGCGGCT CCGGCTGCCG CCCGCCGCCG CGCTGCTCGT CGGCGGCGCG
GGCATCGCGT TCCTGCCCGG GCTGCCGCCC GTCAATCTCG ATCCGGACCT CGTGCTGATC
GTGTTCCTGC CGCCGCTGTT GATGGACGGC GCGTACTTCT CGGTGTGGGA AGAGTTCAAG
CGCAACGTCG GCGGCATCAT GATGCTCGCG ATCGGCGCGG TCGCGTTCAC GACGCTCGCC
GTCGGCGTCG CCGTGCATCT CGTCGCGCCC GGGCTGCCGT GGGCCGCGTG CTTCGCGCTC
GGCGCGATCG TGTCGCCGCC CGACGCGGTC GCCGCGAAGG CGGTGCTCGA GCGCGTCGCG
CTGCCGCGCC GGCTGATGGT GCTGCTCGAA GGCGAGAGCC TCCTGAACGA CGCGGCGGGG
CTCGTGCTGT TCCGCTTCGC GGTTGCCGCC GCGCTGACGG GCGCGTTCAG CACGGGCGAC
GCCGTCGTGC GCTTCGCGCA GCTCGGCGTC GGCGGCGTCG CGGTCGGCTT CATCGTCGGC
TGGCTGATCG TGCGGTTCCT GAAGCTCGTC GAGGACGACT ATCTGGTGAT CACGGTGGCC
GTTCTCGCCG CGTGGATCAG CTACATCGCG GGCGAACTGT TCGAAGTGTC CGGTGTGATC
GCGACCGTGA CGACCGGGAT GATGCTCGGC TGGCATCAGC ACGAAGTGTT CTCGGCTTCG
GTGCGCAACC GCGGTACCGC GTTCTGGCAG GTGATCGTGT TCCTGCTCGA GGCGCTCGTG
TTCGTGCTGA TCGGGCTGTC GCTGCGCGGC GTGATCGAGC GGCTCGGCGG GCTCGGCGAG
GTGTTCGCGA CGATGACGCC CGCGGTGGCG GCGGTGGTCG CGGCCGTCGT CGCGTCGCGC
TTCGTCTGGG TGTTCGCGGT CGAACTGCTG AAGGCGCCCG TCGCGCGCTT GCGCGGGCGT
GGCCCGCGCG GCGACTGGAA GGCGGCGACC GTGATGGGCT GGGCCGGGAT GCGCGGCGTC
GTCACGCTCG CGATCGCGCT GTCGCTGCCG GATGCGATGC CCGGGCGCGA CCTGATTCTC
GTCGCCGCGT TCGCGGTGAT TCTCGTCACC GTGCTGCTGC AGGGCACGAC GATCGGGCCG
CTGATCCGGC TGCTGAAGCT GCGCGATCCG GGGCCCGCAG CACACCATCT GACGGAGCCG
CAGACCTGGG CGCGCGTCGA GGCCGCGCAG CTCTCGGCGA TCCAGCCGCT CGTGCACGAT
GCCGAGGGCA ACGTGATCCA TCCGCGCCTG CTCGAGCAAT ATACGTACCG CGCGAGCGTG
ACCGCGCGCC ATCAGGACGA GCCCGCGTTT CCGCAGCGCG AGCGCGACGC GCATTACGAC
GTCGTGCTCG CGGCGATCGC GGCCGGCCGC GCGGAGCTGC TGCGGCTGCA TCGCGGCGGC
CAGATCCACG ACGAGATGCT GTACCTGCTC GAGCGCGATC TCGATCTGCA GGAGATCGCG
GCGCAGCACG CGAAGGGCTA G
|
|---|
| Protein sequence | MSPVSAFKLV LLSFLAIVAL ELLAKRLRLP PAAALLVGGA GIAFLPGLPP VNLDPDLVLI
VFLPPLLMDG AYFSVWEEFK RNVGGIMMLA IGAVAFTTLA VGVAVHLVAP GLPWAACFAL
GAIVSPPDAV AAKAVLERVA LPRRLMVLLE GESLLNDAAG LVLFRFAVAA ALTGAFSTGD
AVVRFAQLGV GGVAVGFIVG WLIVRFLKLV EDDYLVITVA VLAAWISYIA GELFEVSGVI
ATVTTGMMLG WHQHEVFSAS VRNRGTAFWQ VIVFLLEALV FVLIGLSLRG VIERLGGLGE
VFATMTPAVA AVVAAVVASR FVWVFAVELL KAPVARLRGR GPRGDWKAAT VMGWAGMRGV
VTLAIALSLP DAMPGRDLIL VAAFAVILVT VLLQGTTIGP LIRLLKLRDP GPAAHHLTEP
QTWARVEAAQ LSAIQPLVHD AEGNVIHPRL LEQYTYRASV TARHQDEPAF PQRERDAHYD
VVLAAIAAGR AELLRLHRGG QIHDEMLYLL ERDLDLQEIA AQHAKG
|
|---|
| |