| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0943 |
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| Symbol | linX |
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| ID | 3693356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | - |
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| Start bp | 1202216 |
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| End bp | 1203013 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637731197 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_336101 |
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| Protein GI | 76818584 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAAGA CGAAGCATTT GGCGCCGCGC CTGGCCGGCA AGCGCGCGTT CATCACCGGC
GCTGCGGGCG GCCTCGGGCG CGCGATCGCG CGCCGGATGG CCGAGCAGGG CGCGCAGGTG
TTCTTGACCG ACATCGTCGA CGCGGCCGTG CTCGAGGCGT TCGCGGCCGA GCTCAACGAT
ACGGCCGGCG AGCGCATTGC GTGGGCGGCC GTGCAGGACG TCGCCGACGA AGCGCAGTGG
GCGTCGCGCC TTTCGCAGGC GGCAGACGCG ATGGGCGGGC TGTCGGTGCT CGTGCACAAC
GCGGGCGTCG GCTCGTTCGG CGCGATCGGG CAGATCGCGC GCGACGAGTG GCGGCGCGTG
ATGGCGATCA ACGTCGAGAG CATCGTGCTC GGCACGAAGC ATGCGCTGCC GTATCTGGAG
GCGGGCGCGC CCGCGTCGAT CGTCAATATC TCGTCGGTCG CCGCGTTCAA GCAGGAGCCC
GACTACACCG CGTACAACGC GTCGAAGGCG GCGGTCGCGT CGCTCACGAA GTCGATCGCG
GTGGATTGCG CGCGCCGGCA GACGGAGGTG CGCTGCAACT CGATCCATCC GTCGTTCATC
ATGACGGGCA TCGTCGCGCC GATCGTCCGG CTGGTCGGCG AGAAGGAAGC CGCGCGCAAG
CTCGCGCGCG GCGTGCCGAT GCGCCGGCTC GGCGAGCCCG ACGACGTCGC GCATGCGGCC
GTCTATCTCG CGTCCGACGA GAGCCGCTAC GTGACGGGCG CGGAGCTCGT GATCGACGGC
GGGATGTGCG CGGTCTGA
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| Protein sequence | MTKTKHLAPR LAGKRAFITG AAGGLGRAIA RRMAEQGAQV FLTDIVDAAV LEAFAAELND
TAGERIAWAA VQDVADEAQW ASRLSQAADA MGGLSVLVHN AGVGSFGAIG QIARDEWRRV
MAINVESIVL GTKHALPYLE AGAPASIVNI SSVAAFKQEP DYTAYNASKA AVASLTKSIA
VDCARRQTEV RCNSIHPSFI MTGIVAPIVR LVGEKEAARK LARGVPMRRL GEPDDVAHAA
VYLASDESRY VTGAELVIDG GMCAV
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