| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0927 |
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| Symbol | sig43 |
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| ID | 3692099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | - |
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| Start bp | 1187577 |
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| End bp | 1188842 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637731181 |
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| Product | ECF subfamily RNA polymerase sigma factor |
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| Protein accession | YP_336085 |
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| Protein GI | 76817971 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGCCG CCGTTCACCG TGCGATCGAT GCCGTCTGGC GGATCGAGGC CGCGAGAATC
ATCGCGCACG TCGCGCGGCT CGTGCGCGAC GTCGGCGTGG CCGAAGAGCT CGCGCAGGAC
GCGCTCGTCG CGGCGCTCGA GCACTGGCCG AGCGGCGGCG TGCCGGACAA TCCGGGCGCA
TGGCTGATGA CGGCCGCGAA GCGCCGCGCG CTCGATCATC TGCGGCAGCA CGCGCTGCAC
GCGCGCAAGC GCGAGCAGAT CGGCCTCGAT CTCGATGCGC TCGGCGCGCA CGTCGCGCCT
GACGTCGCCG ACGTGTTCGA AGCGGCGCGC GACGACGACA TCGGCGACGA TCTGCTGCGG
CTCGTGTTCA CCGCTTGTCA TCCGGTGCTG TCGACCGACG CGCGCGTCGC GCTGACGCTG
CGGCTGCTCG GGGGGCTGAC GACGGGCGAG ATCGCGCGCG CGTTTCTCAC GCCGGAGCCG
ACGATCGCGC AGCGGATCGT GCGCGCGAAG CGCACGCTAT CGGCGGCGAA GGTGCCGTTC
GAGGTGCCGC GCGCACCGGA GCGCGCGGCG CGGCTGGCAT CGGTGCTCGA AGTGATCTAT
CTGGTTTTCA ACGAAGGCTA TTCGGCGACG GCGGGCGACG ACTGGATGCG CCCCGCGCTG
ACCGACGAGG CGCTTCGGCT CGGGCGCGTG CTCGCCGGGC TCGCGCCCGA CGAGAGCGAG
GTGCACGGGC TTGTCGCGCT GATGGAGATC CAGGCGTCGC GGATGCATGC GCGGGTCGAT
GCGCAGGGCC GCCCCGTGCT GCTGCTCGAT CAGGATCGCA GCCGCTGGGA TCCGCTGCTG
ATCCGGCGCG GGCTCGCCGC GCTCGCACGC TCGGAGGCGC TCGGCGGCGC GAGCGGGCCC
TATGCGCTGC AGGCGGCGCT CGCCGCATGT CACGCGCGTG CGCGCCATGC CGACGATACC
GACTGGGAGC AGATCGTCGC GCTCTACGAC GCGCTCGCGC AGGTCGCGCC CTCGCCCGTC
GTCGAGCTGA ATCGCGCGGT TGCGGTCGGC ATGGCGTTCG GGCCAGCGGC GGGGCTCGAG
ATCGTCGACG CGCTCGCGGC CGACCCGGCG CTCGCGCGCT ATCACTGGCT GCCGAGCGTG
CGCGGCGATC TGCTCGCGAA GCTCGGGCGG CGCGCCGAGG CGCAGGCCGA ATTCCAGCGC
GCGGCCGACA TGACGCTCAA TGCGCGCGAG CGTGAGATGC TGCTTGCGCG CGCGACGCAG
CGGTGA
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| Protein sequence | MDAAVHRAID AVWRIEAARI IAHVARLVRD VGVAEELAQD ALVAALEHWP SGGVPDNPGA
WLMTAAKRRA LDHLRQHALH ARKREQIGLD LDALGAHVAP DVADVFEAAR DDDIGDDLLR
LVFTACHPVL STDARVALTL RLLGGLTTGE IARAFLTPEP TIAQRIVRAK RTLSAAKVPF
EVPRAPERAA RLASVLEVIY LVFNEGYSAT AGDDWMRPAL TDEALRLGRV LAGLAPDESE
VHGLVALMEI QASRMHARVD AQGRPVLLLD QDRSRWDPLL IRRGLAALAR SEALGGASGP
YALQAALAAC HARARHADDT DWEQIVALYD ALAQVAPSPV VELNRAVAVG MAFGPAAGLE
IVDALAADPA LARYHWLPSV RGDLLAKLGR RAEAQAEFQR AADMTLNARE REMLLARATQ
R
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