| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0879 |
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| Symbol | |
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| ID | 3694307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | - |
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| Start bp | 1140195 |
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| End bp | 1141838 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637731133 |
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| Product | alpha amylase family protein |
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| Protein accession | YP_336037 |
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| Protein GI | 76817678 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.592303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAAT GTCCTCATGA TCCGTATGCG CAGCATCACT CGCATTGCCT GCCGTTCGGC
GCCCAGCCCT GCGGCGCCGC GGGCGCGACG ACACGCACTC ACTTTCGCGT CTGGGCGCCC
GCGCATGCGG CCGTGACGCT CGCGCTCGAC ACCGCGGGCG GCCTGCATGA ATTGCCGATG
GCGCCCGCGG GCGACGGCTG GTTCGAGACG TTCGCCGATT GCGGCGCGCA TACGCGCTAC
CGGTATCGGC TCGACGAGGC GCTGACGATC CCCGATCCGG CGTCGCGCTC GCAGCCGGAA
GGCGCCGACG GGCCGAGCGA GGTGATCGAT CCGCGCGCGT TCACGTGGCG CCACACGTTC
TGGCGTGGCA GGCCGTGGGA GGAGATCGCG CTCTACGCGA TCCAGCCCGG CGCGGCGGGC
GGTTACGACG GTGTCCGTGA GCGCTTGCCG CAGCTCGCGC AGTTGGGCGT CACCGCGCTC
GAGTTGCTCG CGGCGCCGCA GGCGCGCGAC GACAGCCTGC CGTTCGCGCC GATCGCCGCA
TACGGCGGCG TCGACGCGCT CAAGCGCCTG ATCGACGAGG CGCACGGTTT CGGCCTCGCG
GTGCTGCTCG ATCTCGACTA TGCGCGCTTC GGCTGCGGCT CCGATGAAAT GCGGCGCTAC
GCGCAGCCGT TCTTCCACAC CCGCGACGAT CCGCTGCAGG CGCCGCCGCT CGCGCTCGAC
CACCCGCAGG TGTGCGACTT CTTCTGCGAC AACGCGCTGT ACTGGCTCGA AGAATATCGA
TGCGACGGCT TGCGGATCCG CGAGGCGGAC CGCATCGACA GCGCGTGGCT GCGCGAGATC
GCCGATCGCG TGCACGCGGC GATGCCGACC GACCGGATCG TGCATCTCGT GCTCGGCAGC
GAGCGGCATC CGTCGCACCT CGCCGACACG CATTTCGACG CGCAATGGAA CGGTTGCGGC
GAGCGCGCGC TGTACCGGCT GACGGGGCGC CGCGATCGCG CGCACGGCGA CGGCGTGTCG
ACGCATCAGT CGATCCATGC GCTCGCGCGC GCGTTGACCG CGAACGGCGC GGTGTTCCAG
CGCGCGCATC CGGCCGGCGA AGGCGGGATG GCCGACGTCG GCCTGCCGCT GACCTCGCTC
GTGCTGTCCG ACGGCGTCGT GCGCGACGCG CGCGAGGCGG ATCTCGCGGC GCTCGCGCTG
TCGCTGCTGA CGCCGCAGAT TCCGCTGATC TTCGATGAAG CCGCGGGCGA CGCGTCGCGG
CGCCATTTCG TGCAATCGGC GCTCGCGGTG CGCGCGAAGC TGATCGCGCC GCGCCTGATC
GACGTGCGGC CGCGCCGCGC CGACATGCTG CGCGCGGCCG ACGGCGTCGA GGCCGATGCG
CTTGTTGCCG CATGGCGGCT CGGCGACGGC GAGACGCTCA GCATCGCGCT GAACCTGTCG
CCGCAGGCGT TGCCGTTTCA TGGCGCGCCG GACGGAACGA TCGTGTTCGA AACGCCGGCG
CGCGCGCGGG ATCGCGTCGA CGCGGGTGTG CTGCCGCCGT ATGCGCTTGT CGCGTGGCTG
ACGGGCGACG TCAATCAGTA CGCGCTGACG CACGATGTGC GTCGTTACGC GGATGTCGCC
CCGCACTCGC CGGGCGGCGC TTGA
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| Protein sequence | MSECPHDPYA QHHSHCLPFG AQPCGAAGAT TRTHFRVWAP AHAAVTLALD TAGGLHELPM
APAGDGWFET FADCGAHTRY RYRLDEALTI PDPASRSQPE GADGPSEVID PRAFTWRHTF
WRGRPWEEIA LYAIQPGAAG GYDGVRERLP QLAQLGVTAL ELLAAPQARD DSLPFAPIAA
YGGVDALKRL IDEAHGFGLA VLLDLDYARF GCGSDEMRRY AQPFFHTRDD PLQAPPLALD
HPQVCDFFCD NALYWLEEYR CDGLRIREAD RIDSAWLREI ADRVHAAMPT DRIVHLVLGS
ERHPSHLADT HFDAQWNGCG ERALYRLTGR RDRAHGDGVS THQSIHALAR ALTANGAVFQ
RAHPAGEGGM ADVGLPLTSL VLSDGVVRDA READLAALAL SLLTPQIPLI FDEAAGDASR
RHFVQSALAV RAKLIAPRLI DVRPRRADML RAADGVEADA LVAAWRLGDG ETLSIALNLS
PQALPFHGAP DGTIVFETPA RARDRVDAGV LPPYALVAWL TGDVNQYALT HDVRRYADVA
PHSPGGA
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