| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0852 |
|---|
| Symbol | |
|---|
| ID | 3694144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | + |
|---|
| Start bp | 1113827 |
|---|
| End bp | 1114576 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637731107 |
|---|
| Product | decarboxylase family protein |
|---|
| Protein accession | YP_336011 |
|---|
| Protein GI | 76819601 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
|---|
| TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.134375 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAGA GAAAAGTGAT TCCGAGTCTG CGCTCGCTCG CAGATCAAGA ACGCGCGACG
GCGAAGAAGG CCCGCGCTTC GTGGCAGATG TTCACGATTA TGGCAGAGTT TATCGAGGCG
ACCGAGTACC TGTCCGAGAT CCGCCCTGCC GTCAGCATCT ATGGTTCCGC GCGTCTGAAG
CCGGATTCGC CGCACTACAA GCTCACCGTG CAGATCGCGC GCAAGCTGTC CGACGCGGGC
TTCGCCGTGA TCTCGGGCGG CGGCCCCGGC ATCATGGAAG CGGCGAACAA GGGCGCGCAC
GCCGGCAAGG CGCCGTCCGT CGGCCTGAAC ATCGAGCTGC CGCATGAGCA GGCGGGCAAC
CACTTCCAGG ACATCTCGCT GCGCTTTCGC CATTTCTTCA CGCGCAAGGT CACGTTCGTG
AAGAATTCGG ACGCGGTGAT CGTGATGCCG GGCGGCTTCG GCACGCTCGA CGAGCTGTCC
GAAGTGCTCA CGCTGATCCA GACGAAGAAA TCGCGTCTCG TGCCGATCGT GCTCGTCGGC
AGCGCGTTCT GGAGCGGCCT GCTGCAGTGG TTCCGCGACC AGATGATTCC GATGGGCCTC
ATCAATCCGG ACGACATGAA CCTGATGAAG GTGATCGACG ATCCGGACCA GGTGCTCGAA
GCGGTGCTCG CGTTCTACGA GGATCGCGGC GAGGAAACCG AGGAATCGCA CCCGCCGCGC
CCCGAAGAGG ATCGGATGTT CTATCTGTGA
|
|---|
| Protein sequence | MNKRKVIPSL RSLADQERAT AKKARASWQM FTIMAEFIEA TEYLSEIRPA VSIYGSARLK
PDSPHYKLTV QIARKLSDAG FAVISGGGPG IMEAANKGAH AGKAPSVGLN IELPHEQAGN
HFQDISLRFR HFFTRKVTFV KNSDAVIVMP GGFGTLDELS EVLTLIQTKK SRLVPIVLVG
SAFWSGLLQW FRDQMIPMGL INPDDMNLMK VIDDPDQVLE AVLAFYEDRG EETEESHPPR
PEEDRMFYL
|
|---|
| |