| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0851 |
|---|
| Symbol | polA |
|---|
| ID | 3693549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | - |
|---|
| Start bp | 1111054 |
|---|
| End bp | 1113825 |
|---|
| Gene Length | 2772 bp |
|---|
| Protein Length | 923 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637731105 |
|---|
| Product | DNA polymerase I |
|---|
| Protein accession | YP_336009 |
|---|
| Protein GI | 76818134 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
|---|
| TIGRFAM ID | [TIGR00593] DNA polymerase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.280687 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAAG AACGAAATCT GGAAGGTAAG ACCCTGCTAT TGGTTGACGG TTCGAGCTAT
CTGTATCGGG CTTACCATGC GATGCCTGAT TTGCGCGGCC CTGGCGGGGA GCCGACCGGA
GCGCTCTACG GAATCGTCAA TATGTTGCGC CGCATGCGCA AGGATGTCAG TGCAGAGTAT
AGCGCGTGCG TGTTCGACGC CAAGGGCAAA ACCTTCCGCG ACGATCTGTA TGCCGACTAC
AAGGCGCACC GCCCGCCGAT GCCGCCCGAT CTCGCGCTGC AGATCGAGCC GATCCATACG
GCCGTGCGCG CGCTCGGCTG GCCGCTGTTG ATGATCGAGG GCGTCGAGGC CGACGACGTG
ATCGGCACGC TTGCGAAGCA GGCCGAACAA CACGGCATGA ACGTGATCGT CTCGACGGGC
GACAAGGATC TCGCGCAACT CGTCACCGAT CGCGTCACGC TCATCAACAC GATGACGAAC
GAGGCGCTCG ACCGCGACGG CGTGCTCGCG AAGTTCGGCG TGCCGCCGGA GCGGATCGTC
GATTACCTGT CGCTCATCGG CGACACCGTC GACAACGTGC CGGGCGTCGA GAAGTGCGGG
CCGAAGACGG CCGTCAAGTG GCTCACGCAG TACGGCTCGC TCGACGGCGT CGTCGAACAT
GCGGGCGAGA TCAAGGGCGT CGTCGGCGAC AACCTGCGCC GTGCGCTCGA TTTCCTGCCG
CTCGCGCGCA AGCTGGTGAC GGTCGAGACC GGCTGCGAGC TCGCGCCGCA CGTCGAATCG
TTCGACGCGT CGCTCGCGAC GGACGGCGAG GGCCGCGACG CGCTGCGCGA GATCTTCGCG
AAGTACGGCT TCAAGACGTG GCTGCGCGAG CTCGACAGCG AACCCGCCGC CGCGGCCGGT
GCGGCCGCCG CCGGCGCCGC GCCGGATCCG GCGAGCGGCG CGACGGCCGA ACTGCCGCTC
GCCACGGCGC GCAACTACGC GACCGTGCAG ACGTGGGAGC AGTTCGACGC GTGGCTCGCG
AAGATCTCCG CCGCAGAGCT GACCGCGTTC GACACCGAGA CGACGTCGCT CGACCCGATG
CGCGCACAAA TCGTCGGCCT GTCGTTCTCG GTGGAGCCGG GCCATGCCGC GTACGTGCCG
GTTGCGCACC GCGGGCCGGA CATGCCCGCG CAACTGCCGA GCGACGAAGT GCTCGCGAAG
CTCACGCCGT GGCTCGAGGA TGCGGGCAAG AAGAAGCTCG GCCAACACCT GAAGTACGAC
GCGCAGGTGC TCGCGAACTA CGGCATCGCG CTGAACGGCA TCGAGCACGA CACGCTGCTC
GAATCGTATG TGCTCGAATC GCACCGCACA CACGACATGG ACAGCCTTGC GCTGCGCCAT
CTCGGCGTGA AGACGATCAA GTACGAGGAC GTGGCGGGCA AGGGCGCGCA GCAGATCGGC
TTCGACGAGG TGCCGCTCGC GCAGGCGTCC GAGTATGCGG CGGAAGACGC CGACATCACG
CTGCAGCTGC ATCACGCGCT GTATCCGCAG ATCGCGCGCG AGCCGGGCCT CACGCGCGTG
TATCGCGACA TCGAGCTGCC GGTGTCGCTC GTGTTGCGCA AGATGGAGCG CACCGGCGTG
CTGATCGACG GCGACAAGCT GAGCCGCCAG AGCGGCGAGA TCGCGACGCG GCTCGTCGCG
CTCGAGCAGG AGGCGTACGC GCTCGCGGGC GGCGAATTCA ATCTCGGCTC GCCGAAGCAG
ATCGGCCAGA TTTTCTTCGA GCGGCTGCAA TTGCCCGTCG TCAAGAAGAC GCCGAGCGGC
GCGCCGTCGA CCGACGAGGA GGTGCTGCAA AAGCTCGCCG AGGACTATCC GCTGCCGAAG
CTGTTGCTTG AGCACCGCGG CCTGTCGAAG CTGAAATCGA CCTATACCGA CAAGCTGCCG
CGCATGGTCA ATCCGGACAC GGGCCGCGTG CACACGAACT ATGCGCAGGC GGTGGCGGTC
ACCGGGCGGC TCGCGTCGAA CGATCCGAAC CTGCAGAACA TCCCGGTGCG CACGGCCGAA
GGGCGGCGCA TCCGCGAGGC GTTCGTCGCG CCGCCGGGCA GCAAGATCGT GTCCGCCGAC
TATTCGCAAA TCGAGCTGCG CATCATGGCG CACATCTCGG AGGACGAATC GTTGCTGCGC
GCGTTCGCGC ACGGCGAGGA CATTCACCGC GCGACCGCGG CGGAGGTGTT CGGCGTGACG
CCGCTCGAAG TGACGTCCGA TCAGCGGCGC ATCGCGAAGG TGATCAACTT CGGTCTGATC
TACGGGATGA GTTCGTTCGG CCTCGCGTCG AATCTCGGCA TCACGCGCGA TGCGGCGAAG
CTCTATATCG ACCGCTACTT CCTCCGCTAT CCGGGCGTCG CCCGCTACAT GGAGGAAACG
CGCATGCGGG CGAAGGAGAA GGGCTACGTC GAAACCGTGT TCGGCCGCCG CCTGTGGCTG
CCCGAGATCA ACGGCGGCAA CGGGCCGCGC CGCCAGGCCG CCGAGCGCGC GGCGATCAAC
GCGCCGATGC AGGGCACGGC CGCCGATCTG ATCAAGCTGT CGATGATCGC GGTCGACGAC
TGGCTCGAGC GCGGCGGCTT GCGCGCGCGA ATGATCATGC AGGTGCACGA CGAACTCGTG
CTCGAGGTGC CGGAGGACGA GCTGTCCATC GTGCGCGAGA AGCTGCCGGA GATGATGTGC
GGCGTCGCGA AACTGAAGGT GCCGCTCGTC GCCGAGGTCG GCGTCGGCGA GAACTGGGAA
GAGGCGCACT GA
|
|---|
| Protein sequence | MPEERNLEGK TLLLVDGSSY LYRAYHAMPD LRGPGGEPTG ALYGIVNMLR RMRKDVSAEY
SACVFDAKGK TFRDDLYADY KAHRPPMPPD LALQIEPIHT AVRALGWPLL MIEGVEADDV
IGTLAKQAEQ HGMNVIVSTG DKDLAQLVTD RVTLINTMTN EALDRDGVLA KFGVPPERIV
DYLSLIGDTV DNVPGVEKCG PKTAVKWLTQ YGSLDGVVEH AGEIKGVVGD NLRRALDFLP
LARKLVTVET GCELAPHVES FDASLATDGE GRDALREIFA KYGFKTWLRE LDSEPAAAAG
AAAAGAAPDP ASGATAELPL ATARNYATVQ TWEQFDAWLA KISAAELTAF DTETTSLDPM
RAQIVGLSFS VEPGHAAYVP VAHRGPDMPA QLPSDEVLAK LTPWLEDAGK KKLGQHLKYD
AQVLANYGIA LNGIEHDTLL ESYVLESHRT HDMDSLALRH LGVKTIKYED VAGKGAQQIG
FDEVPLAQAS EYAAEDADIT LQLHHALYPQ IAREPGLTRV YRDIELPVSL VLRKMERTGV
LIDGDKLSRQ SGEIATRLVA LEQEAYALAG GEFNLGSPKQ IGQIFFERLQ LPVVKKTPSG
APSTDEEVLQ KLAEDYPLPK LLLEHRGLSK LKSTYTDKLP RMVNPDTGRV HTNYAQAVAV
TGRLASNDPN LQNIPVRTAE GRRIREAFVA PPGSKIVSAD YSQIELRIMA HISEDESLLR
AFAHGEDIHR ATAAEVFGVT PLEVTSDQRR IAKVINFGLI YGMSSFGLAS NLGITRDAAK
LYIDRYFLRY PGVARYMEET RMRAKEKGYV ETVFGRRLWL PEINGGNGPR RQAAERAAIN
APMQGTAADL IKLSMIAVDD WLERGGLRAR MIMQVHDELV LEVPEDELSI VREKLPEMMC
GVAKLKVPLV AEVGVGENWE EAH
|
|---|
| |