| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0821 |
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| Symbol | |
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| ID | 3694065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | - |
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| Start bp | 1074094 |
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| End bp | 1076343 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637731075 |
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| Product | TonB-dependent copper receptor |
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| Protein accession | YP_335980 |
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| Protein GI | 76817611 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01778] TonB-dependent copper receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCCA CATTCCTGCG TCACGCGCCC ACCGCGCGTG GAGACCACGC GCGCCGCCGG
CGGCGCGCGA TCACGCTTAC CGTTCCCGCG CTCGCCGCGG GCGCCTTTCA CCTCGCGCCG
GCCGTCGCGC AGACGAGCGA GGCCGTGCAC GGCCACGGCA CGCTCGGCGC GTCCGGCGTA
GCGAGCCGCG CCGACACCGA CGCGGCGAGC GCCAAATCGG ACGGCGCGGT TCGCGAAGCG
GCGAGCGCCG CGGCGAGCCG CACGACGACC GGCGCCGCGC CGGACGCCAC GACGCTGCCG
ACGATCGAAA TCGTCGCGGC GCCCGAATCG ACGCCGCTCG TCGTCGTCAC CGATCCGAAG
ACGCCGCGCC AGCCGCTGCC CGCGAGCGAC GGCGCCGATT ATCTGAAGAC GATTCCCGGC
TTCGCGTCGA TCCGCAGCGG CGGCACGAAC GGCGACCCGG TGCTGCGCGG GATGTTCGGC
TCGCGGCTGA ACATTCTCGC GAACGGCATG CCGACGCTCG GTGCGTGTCC CGGCCGGATG
GACGCGCCGA CGTCGTACAT CGCGCCCGAG AGCTACGACA AGGTGACGCT CGTCAAGGGG
CCGCAGACCG TGCTGTACGG GCCGGGCGCA TCGGCGGGCA CGGTGCTGTT CGAGCGCGTG
ACGCCGCGCT TCAAGACGCC GGGCATGCGC TTTGACGGCA GCGTCGTCGG CGGCTCGTTC
GGGCGCAACG ATCAGAACGT CGACGTGACG GCCGGCACGC CCGACTTCTA CGGGCGCGTG
AGCGCGAACC ATGCGCACTC GCAGGACTAC GAGGACGGCA ACGGCCGCAC GGTGCCGTCG
CAATGGGACA AGTGGAACGC GGACGCGGCG CTCGGCTGGA CGCCCGACGA CAACACGCGG
CTCGAGCTGA CGGCGGGCAC GGGCGACGGC TACGCGCGCT ATGCGGGCCG CGGAATGGAC
GGCGCGCATT TCCGGCGCGA GACGTTCGGT CTGAAGTTCG ACAAGAAGCA CATCGGCGAC
GTGCTCGATC GCATCGAGGC GCAGGTCTTC TACAACGAAG CCGATCACGT GATGGACAAC
TACACGTTGC GGATGCCCGA TCCGACGAGC AGCATGCCGA TGCGCATGGC CTCCGAAGTG
CGCCGCCGCA CGCTCGGCGC GCGCGTCGCG GCGACGCTGC GCTTGACCGA CGCGTTCAAG
CTCGTGACGG GCGTCGATGC GCAGTCGAAC CGCCTCGACT CGCGCTCGGC GATGGGGATG
CAGAACTACG GCGACAAGCC GTGGAATCCG CAGGCGAACA TGTGGAACGC GGGCGCGTTC
GGCGAGCTGA CCTGGTATGC GAGCGATGCG TCGCGCGTGA TCGGCGGCGC GCGGATCGAC
TATGCGGCCG CGCGCGACAA GCGCGCGACG ACGGGCGGCA TGAAGATGAG CATGCGCAAT
CCGACGTTCG ACGATCTTCG CTCGCGCGTG CTGCCGAGCG GCTTCGTGCG CTACGAGCGT
GATCTCGCGT CGCTGCCCGT CACGTGGTAC GCGGGCATCG GCCATGCGCA GCGCTTCCCT
GATTACTGGG AGCTGTTCTC CGCCAAGCGC GGCCCGAACG GTTCGATCAA CGCATTCTCC
GCGATCAAGC CCGAGAAGAC GACGCAGCTC GACATCGGCG CGCAGTACAA GAGCGACAAG
CTCGACGCCT GGGTGTCCGC CTATGCGGGC TACGTGCAGG ACTTCATCCT GTTCGACTAT
GCGACGGGCC CGATGGGACA GATCACGCAG GCGACGAACG TCAACGCGCA GATCATGGGC
GGTGAGGTGG GCGCGTCGTG GCGTCCGCTC GCGCCGTGGC GCTTCGAAGG GTCGCTCGCG
TATGCGTGGG GGCGCAACGT GCAAAGCGGT GCGCCGCTGC CGCAGATGCC GCCGCTCGAG
GCACGCTTCG GCGTCGAGTA CACTCGCGGG CCGTGGTCGG CGGGCGGGCT GTGGCGGGTC
GTTGCGCCGC AGCATCGCTA CGCGCTGAAC GAGGGCAACG TCGTCGGCAA GGACTTTGGT
CCGAGCGCCG GTTTCGGCGT GCTGTCGCTG CACGCGCAGT ACAACGTGAG CAAGACGGTG
CAGATCTCGG TCGGCGTCGA CAACGTGCTC GACAAGGCTT ATGCGGAGCA CCTGAACCTC
GCGGGCAACG CCGGTTTCGG CTATCCGGCG AATCTGCCTG TCACCGAACC CGGCCGTACC
GCGTGGGTTC GTTTGAGCAC CAAGCTCTGA
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| Protein sequence | MTSTFLRHAP TARGDHARRR RRAITLTVPA LAAGAFHLAP AVAQTSEAVH GHGTLGASGV
ASRADTDAAS AKSDGAVREA ASAAASRTTT GAAPDATTLP TIEIVAAPES TPLVVVTDPK
TPRQPLPASD GADYLKTIPG FASIRSGGTN GDPVLRGMFG SRLNILANGM PTLGACPGRM
DAPTSYIAPE SYDKVTLVKG PQTVLYGPGA SAGTVLFERV TPRFKTPGMR FDGSVVGGSF
GRNDQNVDVT AGTPDFYGRV SANHAHSQDY EDGNGRTVPS QWDKWNADAA LGWTPDDNTR
LELTAGTGDG YARYAGRGMD GAHFRRETFG LKFDKKHIGD VLDRIEAQVF YNEADHVMDN
YTLRMPDPTS SMPMRMASEV RRRTLGARVA ATLRLTDAFK LVTGVDAQSN RLDSRSAMGM
QNYGDKPWNP QANMWNAGAF GELTWYASDA SRVIGGARID YAAARDKRAT TGGMKMSMRN
PTFDDLRSRV LPSGFVRYER DLASLPVTWY AGIGHAQRFP DYWELFSAKR GPNGSINAFS
AIKPEKTTQL DIGAQYKSDK LDAWVSAYAG YVQDFILFDY ATGPMGQITQ ATNVNAQIMG
GEVGASWRPL APWRFEGSLA YAWGRNVQSG APLPQMPPLE ARFGVEYTRG PWSAGGLWRV
VAPQHRYALN EGNVVGKDFG PSAGFGVLSL HAQYNVSKTV QISVGVDNVL DKAYAEHLNL
AGNAGFGYPA NLPVTEPGRT AWVRLSTKL
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