| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0811 |
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| Symbol | scpB |
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| ID | 3693972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 1063599 |
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| End bp | 1065347 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637731065 |
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| Product | sedolisin |
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| Protein accession | YP_335970 |
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| Protein GI | 76817576 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4934] Predicted protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.70323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGGA CCGCCGATTT TGCACTCTCC CTCTCCCCGC TGTGCAAGCG ACTCGCCTGC
GTGTGGCCGC TCGCGCTCGC CGCCGGCATC GCACATGGCG CGACGGATTG GGTCGATACG
CATACCAAAG CTTTCCTGAA TCACGCGCAG ATCGAGACGC TCGCCCGCAG CGCGAACGCT
GCATCGCTCG AGGTCGCGTC GGGCGAAGCC ACGCACGTCG TGGTCAGCCT GAAGCTGCGC
AACGCCGAGC AATTGAAAGC CGTCGCGCGC AACGTCAACG ATCCGCATAG CGCGCAGTAT
CGGCAGTACA TCACGAGCGC GCAGTTCCTC GCGAACTATG CGCCGACCGA AGCGCAGGTG
AAACAGGTCG TCGCCTATTT GCGCAAGAAC GGCTTCGTCG ACATCCACGT CGCGCCGAAT
CGCATGCTCG TCTCCGCGCG CGGCACCGCC GGCACGGTCA AGCAGGCGTT CAACACGTCG
CTCGTGCATT TCGAGTACGC GGGCCGCGCG GGCTTCGCGA ACGCGTCGAC GGCGCAAGTG
CCGCGTGCGC TCGGCGACAT CGTCGGCTCC GTGCTCGGCC TGCAGAACGT CGCGCGCGCC
CGGCCGCTCA CGAAGATCGG CGCGATCGCG AAACCGCTCG CGCTCGCGTC CGGCACGGCG
ACGGGCCACT ATCCATCCGA GTTTCCGGCG CTCTACAACG CAACGGGCGT GCCCACCGCG
GCGAACGCGA CGGTCGGCAT CATCACGATC GGCGGCGTGT CGCAAGCGCT GTCGGATCTG
CAGCAGTTCA CGAGCGCGAA CAGCTATCCG GACGTGTCGA CGCAGACCAT CCAGACCAAC
GGTTCCGGCG GCAACTACAG CGACGATCAG GAAGGCCAGG GCGAATGGGA TCTGGACAGC
CAGTCGATCG TCGGCGCCGC GGGCGGCCAG CTCGGGCAAC TGATCTTCTA CATGGCCGAT
CTCGACGCGT CGGGCAACAC CGGCCTCACG CAGGCATTCA ACCAGGCGGT GTCGGACAAC
GCGGCGAAAG TGATCAACGT CTCGCTCGGC TGGTGCGAAA CCGATGCGAA CGCGGACGGC
ACGCTTTCCG CCGAAGAGCA GATCTTCACG CAGGCGGTCG CGCAAGGTCA GACGTTCGCG
GTGTCCTCAG GCGACGAAGG CGTCTACGAG TGCAACAACC GCGGCTATCC CGATGGTTCG
AACTACACGG TATCGTGGCC GGCGTCGTCG CCGCACGTGC TCGCGATCGG CGGCACGACG
CTCTACACGA CTTCGTCGGG CGCATTCTCG AACGAAACGG TATGGAACGA AGGGCTCGAC
GGCAACGGCA AGCTGTGGGC GACGGGCGGC GGCGTCAGCA CGATCCTGCC GAACCCGTCA
TGGCAGTCGG GCAGCCATCG CAAGCTGCCG GACATATCGT TCGACGCCGC GCAAAGCACG
GGCGCGTATA TCTACAATTA CGGCCAGTTG CAGCAGATCG GCGGCACGAG CCTGTCGGCG
CCGATTTTCA CGGGCTTCTG GGCGCGGCTC CTGTCGGCGA ACGGCACGGG TCTCGGCTTC
CCGGCCGCGC GCTTCTACCA CTCGATTCCG ACCCACGCGT CGCTCGTGCG CTACGACGTC
ACGTCGGGCA ACAACGGCTA TTCGGGATAC GGCTACAAGG CATCGACCGG CTGGGACTAC
CCGACCGGCT GGGGCAGCAT CAACATCTCG AACCTGAATC AGTTGATCCA GTCGGGCGGC
TTCAATTGA
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| Protein sequence | MNRTADFALS LSPLCKRLAC VWPLALAAGI AHGATDWVDT HTKAFLNHAQ IETLARSANA
ASLEVASGEA THVVVSLKLR NAEQLKAVAR NVNDPHSAQY RQYITSAQFL ANYAPTEAQV
KQVVAYLRKN GFVDIHVAPN RMLVSARGTA GTVKQAFNTS LVHFEYAGRA GFANASTAQV
PRALGDIVGS VLGLQNVARA RPLTKIGAIA KPLALASGTA TGHYPSEFPA LYNATGVPTA
ANATVGIITI GGVSQALSDL QQFTSANSYP DVSTQTIQTN GSGGNYSDDQ EGQGEWDLDS
QSIVGAAGGQ LGQLIFYMAD LDASGNTGLT QAFNQAVSDN AAKVINVSLG WCETDANADG
TLSAEEQIFT QAVAQGQTFA VSSGDEGVYE CNNRGYPDGS NYTVSWPASS PHVLAIGGTT
LYTTSSGAFS NETVWNEGLD GNGKLWATGG GVSTILPNPS WQSGSHRKLP DISFDAAQST
GAYIYNYGQL QQIGGTSLSA PIFTGFWARL LSANGTGLGF PAARFYHSIP THASLVRYDV
TSGNNGYSGY GYKASTGWDY PTGWGSINIS NLNQLIQSGG FN
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