Gene BURPS1710b_A0799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A0799 
SymbolprpD 
ID3694317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp1046059 
End bp1047510 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content68% 
IMG OID637731053 
Product2-methylcitrate dehydratase 
Protein accessionYP_335958 
Protein GI76817688 
COG category[R] General function prediction only 
COG ID[COG2079] Uncharacterized protein involved in propionate catabolism 
TIGRFAM ID[TIGR02330] 2-methylcitrate dehydratase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCCC CTATCCCGAA CGTCCGGCCA GCGCCGGATT CAGTGCTGGT CGAGATCGCC 
GACTACGCGC TGAACCATCG CATCGACAGT GCGCTCGCGC TCGAAACCGC GCGCCACTGC
CTGATCGATA CGCTCGGGTG CGGGCTCGAG GCGCTGTCGT ATCCCGCCTG CACCAAGCTG
CTCGGGCCGA TCGTGCCCGG CACGATCGTG CCGCACGGCG CGAAGGTGCC GGGCACGTCG
CTGCAGCTCG ACCCGGTGCA GGCCGCGTTC AACATCGGCG CGGCGATCCG CTGGCTCGAC
TTCAACGACA CGTGGCTCGC GGCCGAATGG GGCCATCCTT CGGACAACCT GGGCGGCATC
CTCGCGACGG CCGACTGGCT CTCGCGCACC GCCGTCGCGT CCGGCAAGCG GCCGCTCGCG
ATGAAGGACG TGCTCGTCGC GATGATCCAT GCGCATGAGA TCCAGGGCTG CCTCGCGCTC
GAAAATTCGT TCAATGCGGT CGGCCTCGAT CACGTGCTGC TCGTGAAGGT CGCCTCGACC
GCGACCGTCG GCTGCCTGCT CGGCCTCACG CGCGACGAGC TGATCAACGC GCTGTCGCTC
GCGTTCGTCG ACGGCCAGGC GCTGCGCACC TATCGCCACG CGCCGAACAC CGGCTCGCGC
AAGTCGTGGG CGGCGGGCGA CGCGACCTCG CGCGCGGTGC GCCTCGCGCT GATCGCGAAA
ACGGGCGAGA TGGGCTACCC GCGCGCGCTC ACCGCGAAAA CCTGGGGCTT CTACGACGTG
TCGTTCGGCG GCAAGCCGTT CCGCTTCCAG CGCCCATACG GCACCTACGT GATGGAGAAC
GTGCTGTTCA AGATCTCGTA TCCGGCCGAA TTCCACGCGC AGACGGCCGT CGAAGCCGCG
ATGACGCTGC ACGCGCGGCT CGCGGCAGCC GGGCGCACCG CCGACGAGAT CCGCCGCGTC
ACCGTGCGCA CGCATGCGGC CGCGATGCGC ATCATCGACA AGCAAGGGCC GCTCGCGAAC
CCGGCCGACC GCGATCACTG CATCCAGTAC ATGATCGCCG TGCCGCTCCT GTTCGGCCGC
CTCACGGCCG CCGACTACGA GGACGCGGTG GCGGCCGATC CGCGGATCGA CGCGCTGCGC
GCGAAGATCG CGTGCGTCGA GGACCCGCAG TTCACGCAGG ATTATCACGA CCCGGCGAAG
CGCTCGATCG CCAATGCGCT CACGATCGAG TTCGACGACG GATCGACGCT CGCCGAGGTG
GCGGTCGAAT ACCCGATCGG CCACATGCGC CGGCGCGCCG AAGGGATGGC GCTCCTGATC
GACAAGTTCA GGACGAATCT CGCGCGCCGC TTTCCGGCCA AGCAGCAACA AGCGATTCTC
GACGTGTCGC TGGACCAGGC AAAGCTCGAA GCGATGCCGG TCGATGAGTA CGTCGATCTG
TATGTGATCT AG
 
Protein sequence
MSAPIPNVRP APDSVLVEIA DYALNHRIDS ALALETARHC LIDTLGCGLE ALSYPACTKL 
LGPIVPGTIV PHGAKVPGTS LQLDPVQAAF NIGAAIRWLD FNDTWLAAEW GHPSDNLGGI
LATADWLSRT AVASGKRPLA MKDVLVAMIH AHEIQGCLAL ENSFNAVGLD HVLLVKVAST
ATVGCLLGLT RDELINALSL AFVDGQALRT YRHAPNTGSR KSWAAGDATS RAVRLALIAK
TGEMGYPRAL TAKTWGFYDV SFGGKPFRFQ RPYGTYVMEN VLFKISYPAE FHAQTAVEAA
MTLHARLAAA GRTADEIRRV TVRTHAAAMR IIDKQGPLAN PADRDHCIQY MIAVPLLFGR
LTAADYEDAV AADPRIDALR AKIACVEDPQ FTQDYHDPAK RSIANALTIE FDDGSTLAEV
AVEYPIGHMR RRAEGMALLI DKFRTNLARR FPAKQQQAIL DVSLDQAKLE AMPVDEYVDL
YVI