| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0761 |
|---|
| Symbol | metZ |
|---|
| ID | 3693037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | - |
|---|
| Start bp | 1007291 |
|---|
| End bp | 1008508 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637731015 |
|---|
| Product | O-succinylhomoserine sulfhydrylase |
|---|
| Protein accession | YP_335920 |
|---|
| Protein GI | 76819395 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.203208 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTGA AAACGGATGA ACGGAACATG GACGACTCTC TCAACTTCGA CACGCTCGCC
GTCCGCTCGG GCACGCTGCG CAGTGAATTC AACGAGCATT CGGAAGCGCT CTTCCTCACG
TCGAGCTTCT GCTACGCGAG CGCGGCCGAG GCGGCCGAGC GCTTCAAGCA TTCGGAAGAC
TACTACACGT ACTCGCGCTT CACGAATCCG ACCGTCACGA TGTTCCAGGA TCGCCTCGCG
GCGCTCGAGG GCGGCGAGGC GTGCATCGCG ACCGCGTCCG GAATGGCGGC GATCACGTCG
GTCGTGATGG CTGCGCTGCA GGCGGGCGAT CACCTCGTCA GCTCGCGCAG CCTGTTCGGC
TCGACGCTCG GGCTGTTCGG GCAGATCTTC GCGAAGTTCG GCATCGAGAC GACGTTCGTC
GATCCGGCCG ATCTCGACGC ATGGCGCGCC GCCGTGCGCC CCGAGACGAA GATGTTCTTC
CTCGAGACGC CGTCGAACCC GATGACCGAG CTCGCCGACA TCGAGGCGGT GGGCAGGATC
GCGAAGGCGG CCCATGCGCT GTTCGTCGTC GACAACTGTT TCTGCAGCCC GGTGCTGCAG
CAGCCGCTCA AGCTCGGCGC GGACGTCGTG ATGCATTCGG CCACCAAGTT CCTCGACGGT
CAGGGGCGCG TGCTCGGCGG CGCGCTCGTC GGCTCGAAGG CGTTCATCAT GGAGAAGGTG
TTCCCGTTCG TGCGCACCGC GGGGCCGACG CTGTCCGCGT TCAATGCGTG GGTGCTGCTC
AAGGGCATGG AGACGCTGTC GCTGCGCGTG AACCGGCAAT CGGAGAACGC GCTCGAGATC
GCCCGCTGGC TCGAGGCGCA TCCGGCCGTG AAGCGCGTGT TCTATCCGGG GCTCGAATCG
CATCCGCAGC ATGCGCTCGC GAAGCGCCAG CAGAAATCGG GCGGCTCGGT CGTGTCGTTC
GAGCTGAACG GCGATACGCC GGAGCAGCAG CGCGCGAACG CGTGGCGTGT GATCGACGGC
ACGAAGATCG TATCGATCAC CGCGAACCTC GGCGACACGC GCACGACGAT CACGCATCCG
GCGACGACGA CGCACAGCCG GATCGCGCCG GAAGCGCGCG AGGCGGCGGG GATCACCGAA
GGGCTGATCC GGCTCGCGGT CGGGCTCGAG GATCCGGCCG ACATCCGCGA CGATCTCGCG
CGCGGGCTCG CCGGCTGA
|
|---|
| Protein sequence | MRLKTDERNM DDSLNFDTLA VRSGTLRSEF NEHSEALFLT SSFCYASAAE AAERFKHSED
YYTYSRFTNP TVTMFQDRLA ALEGGEACIA TASGMAAITS VVMAALQAGD HLVSSRSLFG
STLGLFGQIF AKFGIETTFV DPADLDAWRA AVRPETKMFF LETPSNPMTE LADIEAVGRI
AKAAHALFVV DNCFCSPVLQ QPLKLGADVV MHSATKFLDG QGRVLGGALV GSKAFIMEKV
FPFVRTAGPT LSAFNAWVLL KGMETLSLRV NRQSENALEI ARWLEAHPAV KRVFYPGLES
HPQHALAKRQ QKSGGSVVSF ELNGDTPEQQ RANAWRVIDG TKIVSITANL GDTRTTITHP
ATTTHSRIAP EAREAAGITE GLIRLAVGLE DPADIRDDLA RGLAG
|
|---|
| |