Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A0719 |
Symbol | |
ID | 3692683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 956818 |
End bp | 958074 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637730973 |
Product | hypothetical protein |
Protein accession | YP_335878 |
Protein GI | 76819121 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.384757 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGACTT CAGTCGCGCC ACCCTCGGCG ACAAGCGAAG CGGTCAGCCA TCGCAACACC GCTGTGCTCG TCGTCTTCAC CGCATTGACG AATCTCGCCG ATGGCGTGAC GAAGGTCGCG CTGCCGCTGA TGGCGACCGC ACTCACGCAC TCGCCCGCGC GCATCTCGGG CGTATCACTG ACACTGACGC TGCCCTGGCT GCTCGTCGCG CTTCACGTCG GCGTGCTGGT GGACCGCTTC GATCGCCGCA CGCTGCTGTG GCTCGCGAAC GCGGCGCGCA TGGCCGCCAT GGCGCTGCTC ATCGCGCTGC TGCCATCCGG CCGCGTCACG CTGCCGGTGC TGTACGCGAG CGGCCTGACG CTCGGCCTCG CCGAGGTCGT CGCGCTGACT TCCGCGGCCG CCTTGATTCC GGACGCCGTC GCCCCTTCGA GCCGCGAGCG CGCGAACGCA TGGATCGCCG GCGCGGAGAC CGTCTGCAAC GAATTCTGCG GCCCGCTCAC CGGCGGCATG CTGGTCGCGG CCGGCACGGC GATCGCGCTC GGCGCCGTTG CCGTCGGCTA CTTCGGCGGC GGCGTCGCGC TGTTTTTCCT GATCGGGCGG TTCCGCGTCG CGCATGCGCC GCATGGGCGG CCGCCGCCCG TTCGCCTGCA GATTGCCGAA GGGCTCGGAT GCCTGTGGCA CCAGCCGTTG CTCCGGCTGA TGGCCGTCGC GCTGACGGTG CTCTGCATGT GCTGGGGCGC ATGGCTCGCG CTGATGCCGC TGTTCGCGAC GACGGTGCTC GGCCTCGACT CGCGCGGCTA TGGCGTGACG GTCAGCGCGC TCGGCGTCGG CGGCTTCGTC GGCGCGCTGA GCGTCACCTT GCTGAACCGC CGCTTCGGGC GGCGCACCGT CATGCTCACG GATCTGCTCG GCACCTTCGC GATGATGGCC GTACCGGTGC TGAGCACGAA CCTATGGGCC GTCGCGGCGA GCGCATTCGC GGGCGGCCTG GGCGGCACGC TGTGGACGGT CAATGCGAGG ACGATCAGCC AGCATCTCGT GCCGGGGCCG CTGCTCGGCC GCTACAATGC GGCGGCCCGC CTGTTCAGTT GGGGAGCGAT GCCGATCGGC GCGGGCCTTG CCGGCGCGAT CGCGGAACTG CTGGGCATGC GCGCCGCGTT CGCGGCGCTC GCCGTCGCGG CCTTGCTGTT GATCGTGCCG TTCCTGCGCG TCGCTTCGGC GCAAGCGCTG CGAATCGGCC CCGAACGCCG ACATTGA
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Protein sequence | MLTSVAPPSA TSEAVSHRNT AVLVVFTALT NLADGVTKVA LPLMATALTH SPARISGVSL TLTLPWLLVA LHVGVLVDRF DRRTLLWLAN AARMAAMALL IALLPSGRVT LPVLYASGLT LGLAEVVALT SAAALIPDAV APSSRERANA WIAGAETVCN EFCGPLTGGM LVAAGTAIAL GAVAVGYFGG GVALFFLIGR FRVAHAPHGR PPPVRLQIAE GLGCLWHQPL LRLMAVALTV LCMCWGAWLA LMPLFATTVL GLDSRGYGVT VSALGVGGFV GALSVTLLNR RFGRRTVMLT DLLGTFAMMA VPVLSTNLWA VAASAFAGGL GGTLWTVNAR TISQHLVPGP LLGRYNAAAR LFSWGAMPIG AGLAGAIAEL LGMRAAFAAL AVAALLLIVP FLRVASAQAL RIGPERRH
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