Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A0686 |
Symbol | |
ID | 3692818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 882312 |
End bp | 883640 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637730940 |
Product | type III secretion system ATPase |
Protein accession | YP_335845 |
Protein GI | 76817792 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family [TIGR02546] type III secretion apparatus H+-transporting two-sector ATPase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.328516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGCGC TGGCCGATCT GTCCCGCGTC GCCGACGCGA TGGCCGCCCG ACTCGCGATC GAGCCCGCCG TCGGCATGAC CGGCAAGGTG CTCGAAGTGA TCGGCACGCT CGTGCGCGTG GTCGGCCTCG AAGCGACGCT CGGCGAGCTC TGCGAGCTGC GCGGCGCGTC GGGCGCGCTG ATCCAGCATG CGGAAGTCGT CGGCTTCACG CGCAACGTCG CGCTGCTGTC GCCGTTCGGC ACGCTCGGCG AGATCAATCG CGGCACGCGC GTGATCGGCC TGCGGCGGCC GCTGTCGGTG AAGGTCGGCA ACGGCATCCT CGGGCGCGTG ATCGACAGCT TCGGCGAGCC GATCGACGGG CGCGGCGAGC TCGACTACGA CGCGCTGCGC CCCGTGCTCG CGGCGCCGCC GAACCCGATG TCGCGGCGCA TGGTCGACGC CTCGCTCGCG ACCGGCGTGC GCATCGTCGA CGGCCTGATC ACGCTCGGCG AAGGCCAGCG CATGGGGATC TTCGCGCCCG CCGGCGTCGG CAAGAGCACG CTGCTCGGCA TGTTCGCGCG CGGCGCGTCG TGCGACGTCA ACGTGATCGC GCTGATCGGC GAGCGCGGCC GCGAGGTGCG CGAGTTCGTC GAGCTGATCA TGGGCGAGGA CGGGATGGCG CGCTCGGTCG TCGTGTGCGC GACGTCCGAC CGCTCGTCGA TCGAACGCGC GAAGGCCGCG TACGCGGCGA CCGCGATCGC CGAGTACTTC CGCGACCAGG GCAAGCGCGT GCTGCTGATG ATGGATTCGC TCACGCGCTT CGCGCGCGCC GGCCGCGAGA TCGGCCTCGC GGCCGGCGAG CCGCCGGCGC GGCGCGGCTT CCCGCCTTCC GTGTTCGCCG AGCTGCCGCG CCTGCTCGAG CGCACCGGGA TGGGCGAGCA CGGCTCGATC ACCGCGCTCT ACACGGTGCT CGCCGAGGAT GACTCCGGCA GCGATCCGAT CGCCGAGGAA GTGCGCGGCA TTCTCGACGG CCACATCATC CTGTCGCGCG AGATCGCCGC GCGCAACCAG TATCCGGCGA TCGACGTGCT CGGCAGCCTG TCGCGGATCA TGCCGCAGGT CGCGACGCGC GAGCATGTCG GCGCGGCCGG CCGGCTGCGC CAGTTGCTCG CGAAGCACCG CGAGATCGAG ACGCTGTTGC AGCTCGGCGA ATACCAGGCA GGCAGCGATC CGGCCGCCGA CGAGGCGGTC GCGAAGATCG ACCGGATCCG TGCGTTCCTT AACCAGCGCA CCGACGAATA CTCGCCGCCC GACGCGACGC TCGCCGCGCT GCACGAGCTC GCCCGATGA
|
Protein sequence | MNALADLSRV ADAMAARLAI EPAVGMTGKV LEVIGTLVRV VGLEATLGEL CELRGASGAL IQHAEVVGFT RNVALLSPFG TLGEINRGTR VIGLRRPLSV KVGNGILGRV IDSFGEPIDG RGELDYDALR PVLAAPPNPM SRRMVDASLA TGVRIVDGLI TLGEGQRMGI FAPAGVGKST LLGMFARGAS CDVNVIALIG ERGREVREFV ELIMGEDGMA RSVVVCATSD RSSIERAKAA YAATAIAEYF RDQGKRVLLM MDSLTRFARA GREIGLAAGE PPARRGFPPS VFAELPRLLE RTGMGEHGSI TALYTVLAED DSGSDPIAEE VRGILDGHII LSREIAARNQ YPAIDVLGSL SRIMPQVATR EHVGAAGRLR QLLAKHREIE TLLQLGEYQA GSDPAADEAV AKIDRIRAFL NQRTDEYSPP DATLAALHEL AR
|
| |