| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0685 |
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| Symbol | |
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| ID | 3692874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 881599 |
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| End bp | 882315 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637730939 |
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| Product | type III secretion system protein HrpB |
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| Protein accession | YP_335844 |
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| Protein GI | 162210110 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02499] type III secretion apparatus protein, HrpE/YscL family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.129872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTTT GGCTGAAAAA CCGGCAGATT CCGCTCGTCG ACGATCTGCG CATCGACGCG
CCGCACGGCG TGCTGCGCCG CGACGCGTTC GAGACGGTTC AGGCGCTCGG CGCCGCGCTC
GACGCGCTCG CGGCGGAGCG CGACGCGGTG CTGCGCGCGG CGCGCGACGA TGCCGAGCGA
ATCGCCGCCG GCGCGCGCGC GCAAGCCGAC GCGCTCGTCG AAGCCGCGCG GCGCGAGCAC
GACAGCGCCT ACGCGCGCGG CTACGACGCG GGCCGCGCGC AGGCGATCGC CGACTGGCAC
GCGCGGGCGG CCGATTCGTT CGAGCAGGAG CGGCGCGTGC GCGACCGGAT GCGCGAGCGG
CTCGCGGAGC TCGTCGCCGC GGCCGTCCAG CAGATGGTGC ATACGGAGGA TGCGCGCGGC
CTCTTCGCGC GCGCGGCGCA GACGATCGAG CGCATCGTCG CCGGCGCGAG CTATCTGACG
GTGCGCGTGT GCGACGCCGA TTACGACGCG GCGCGCGAGC AGTTCGGCCT GCTTGCCGAC
GCATGGCGCC GGCAAGGGCG CAACGTGCCC GTCGATGTCG TCGTCGAGCC GCGCGTCGCG
CGCGGCACCT GCGTGTGCGA ATCCGATTTC GGCACCGTCG ACGCGAGCCT CGATACCCAA
CTGAACGCGA TCCGCGCGGC GCTCGCCCGC GCGCTCGACG ACGCGGGGCG CGCATGA
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| Protein sequence | MAFWLKNRQI PLVDDLRIDA PHGVLRRDAF ETVQALGAAL DALAAERDAV LRAARDDAER
IAAGARAQAD ALVEAARREH DSAYARGYDA GRAQAIADWH ARAADSFEQE RRVRDRMRER
LAELVAAAVQ QMVHTEDARG LFARAAQTIE RIVAGASYLT VRVCDADYDA AREQFGLLAD
AWRRQGRNVP VDVVVEPRVA RGTCVCESDF GTVDASLDTQ LNAIRAALAR ALDDAGRA
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