| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0683 |
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| Symbol | sctJ |
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| ID | 3693517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 880092 |
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| End bp | 880940 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637730937 |
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| Product | lipoprotein transmembrane protein |
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| Protein accession | YP_335842 |
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| Protein GI | 76819642 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain
[TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0921981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCAC TCCGTCTCCC GATTTCCGCC GCCGGCGCGC GCCGCGCCGC CCGCCTCGCC
GCGCTCGTCG CGTGCGTGGC GCTCTTCGCC GGCTGCCGGC AGGAGCTGTA CGGCGGCCTC
GCCGAGCGCG ACTGCAACGA GATGATGGCC GCGCTGCTGC AAAACGGCGT CGACGCGCAG
AAGAAGACGC CCGACGGCGG CAAGACATGG ACGCTCGCCG TCGACGACAA GCAGATCGTC
AAGGCGATGG AAGTGCTGCG CGCGCGCGGG CTGCCCGCGA CGCGCTACGA CGATCTCGGC
GCGCTGTTCA AGAAGGACGG CCTCGTGTCG ACGCCGACCG AGGAGCGCGT GCGCTTCATC
TACGGCGTGT CGCAGGAGCT GTCGGACACG CTGTCGAAAA TCGACGGCGT CGTCGTCGCG
CGCGTGCACA TCGTGCTGCC GAACAACGAT CCGCTCGCGC AGGTCGCGAA GCCCTCGTCG
GCCTCGGTGT TCATCAAGTA CCGGCCGAAC GCGAATCTCG CGACGCTCAC GCCGCAGATC
AAGAACCTCG TCGTTCATAG CGTCGAAGGG CTGACGTACG ACGAAGTGAG CGTCACCTCC
GTCGCGGCCG ATCCGGTCGA TCTCGTGTCG GCCGCGCAGC CCGCCGCGCA GAACTCCCGC
GGCGCGACGC TCGTCGGCGT GCTGATCGCG CTCGCCGTGG GCGGCGCGCT CGCGGCCGCG
GGCGGCGCGC TGTGGTGGCG CGCGCGCAAG CGCGGCGGCG GCGCGGGCGC GCACGGGATC
GCCGCGCGGC CGCGCGGCGG CGCCCGCGAC GCGAAGGCCG CCGCGCCCCG GCAGGCCGGC
GCGCAATGA
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| Protein sequence | MKPLRLPISA AGARRAARLA ALVACVALFA GCRQELYGGL AERDCNEMMA ALLQNGVDAQ
KKTPDGGKTW TLAVDDKQIV KAMEVLRARG LPATRYDDLG ALFKKDGLVS TPTEERVRFI
YGVSQELSDT LSKIDGVVVA RVHIVLPNND PLAQVAKPSS ASVFIKYRPN ANLATLTPQI
KNLVVHSVEG LTYDEVSVTS VAADPVDLVS AAQPAAQNSR GATLVGVLIA LAVGGALAAA
GGALWWRARK RGGGAGAHGI AARPRGGARD AKAAAPRQAG AQ
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