| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0586 |
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| Symbol | |
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| ID | 3694138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | - |
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| Start bp | 778426 |
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| End bp | 779445 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637730840 |
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| Product | YscC/HrcC family type III secretion outer membrane protein |
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| Protein accession | YP_335745 |
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| Protein GI | 76817430 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02516] type III secretion outer membrane pore, YscC/HrcC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000694626 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTGC CCGCGCCGCT CGACGCCGGC AACGCGCCGG GCGGCGCGGG CTCGACGCAT
TCGACAAACC CGGCGAACGC CGCGAGCCCG ATGGGCGGCG CGGCGGGCGG CGTCGCGCTG
CCCGCGTCGG ACGGCGTGCG CGCGGTGGCG TATCCGGACA CCAACAGCGT GATCCTCGTC
GGCCGGCTCG ACAAGGTGCA GGACATGGAG GCGCTGATCC GCTCGCTCGA TGTCGAGAAG
CGGCAGATCG AGCTGTCGCT GTGGATCATC GACATCCGCA AGAGCCGGCT CGATCAGCTC
GGCATCGACT GGCAGGGTGC GCTCAATGCG CCGGGTATCG GCGTCGGCTT CAACAATCGC
GGCGGCAACG TGACGACGCT CGACGGCACC AGGTTCCTCG CATCGGTCGC GGCGCTCAGC
CAGACGGGCG ACGCCACCGT GATCTCGCGG CCGATCGTGC TCACGCAGGA GAACGTGCCG
GCGACGTTCG ACAGCAACCA GACGTTCTAC GCGAAGCTGA TCGGCGAGCG CACGGTGCAG
CTCGATCACG TGACCTACGG CACGCTCGTC AACGTGCTGC CGCGGCTCAC GCGCGATGGG
TCGCAGGTCG AGATGATCGT CGACATCGAG GACGGCAACA CCGACGGCGC GACGAGCGAC
GGCCAGATCG TCATCGACAA CAACACGATG CCGCTCGTGA ACCGCACCGA GATCAACACG
GTCGCGCGCG TGCCGCACGA GATGAGCCTG CTCATCGGCG GCAACACGCG CGACGACGTC
ACGCGCCGCA CGTTCCGGAT TCCCGGGCTG GCCAGCATTC CGCTGATCGG CGGGCTGTTT
CGCGGGCATT CGGATCGGCA CGAGCAGGTG GTGCGCGTGT TCCTGATCCA GCCGAAGCTG
CTGCGCGCGG GCGCGGCCTG GCCCGACGGC CAGCCGTGGG AATCGGGCGA TCCGGCGGAC
AACGCGACGC TGCGCGCGAC CGTGCAGATG CTCAAACCCT ACATGGACGA CAAGTCATGA
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| Protein sequence | MRLPAPLDAG NAPGGAGSTH STNPANAASP MGGAAGGVAL PASDGVRAVA YPDTNSVILV
GRLDKVQDME ALIRSLDVEK RQIELSLWII DIRKSRLDQL GIDWQGALNA PGIGVGFNNR
GGNVTTLDGT RFLASVAALS QTGDATVISR PIVLTQENVP ATFDSNQTFY AKLIGERTVQ
LDHVTYGTLV NVLPRLTRDG SQVEMIVDIE DGNTDGATSD GQIVIDNNTM PLVNRTEINT
VARVPHEMSL LIGGNTRDDV TRRTFRIPGL ASIPLIGGLF RGHSDRHEQV VRVFLIQPKL
LRAGAAWPDG QPWESGDPAD NATLRATVQM LKPYMDDKS
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