| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0549 |
|---|
| Symbol | |
|---|
| ID | 3692037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | + |
|---|
| Start bp | 740509 |
|---|
| End bp | 744408 |
|---|
| Gene Length | 3900 bp |
|---|
| Protein Length | 1299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 637730801 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_335706 |
|---|
| Protein GI | 76818261 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.553275 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTCTGCG CGGCGCTCGC CGGATGGCTG CTGTGCCGCG TCGCGCGCCG CGCGCTGCGC
GCGGTTCGTG CGCGCGCGCA GCTCGCACGG CTCGACGCAT CCGAGCGCCT GCCCGCGGCC
GACGCGCCGG AGCTGCGCGT CGCCGCGCGC TGGCGCACCG CGCTCGCCGC GCTCGGGCGC
GCGCAGCCCG CGCCGCGCCT GCGCGGCCGG CCGCGCGACG CGCTGCCGTG GTATCTCGTG
ATCGGCCCCG AGGGCGCGGG CAAGACAACC GCGCTCGCAC GCGCGCGCCT CGTGTCGCCG
CTGCGGCACG CGCGCGACGA CGCGGCCATC GCGCCGACCG AGGACTGCGA CTGGTGGTGC
TTCGACGACG CGGTCGTGCT CGATCTCGCG GGCCGCTTCG CCGCGCCCGG CGCGACCGAC
GACGATCGCC GCGCATGGCA CGCGCTCCTC GAGCAGCTCG GCCGCGCGCG TGCGCGCCGG
GGCGTGAACG GCGTCGTGGT CGCGATCGAC GCGCCGCGCC TCATCGAAGC GAGCCGCGAT
GCGCTGACGA TCGAAGGCAG CGCCATTCGC GAACGGCTCG AGCAACTGAT CCGCCTGTTC
GACCGGCGCT TTCCGGTGTA CGTGCTCGTC ACGCAATGCG ACCGGCTCTA CGGCTTCGAC
GAATGGGCCG CGCAGCTCGC GCCGGAACAA CGCGAGCGCG CGTTCGGCTA TCTCGGCGAT
CACGACGCGG ATGCGTTCGT CGCGCGCGCG CTCGACAGCC TCGACGCACG GCTCGGCGCA
CTGCGCGTCG CGCTGGCGGC GCGCGGCGAG CCGCCGTCGC CGCGCGCGCT GATGCTGCCG
CACGAACTCG CGTGCCTGCG GCCCGCGCTC GAGGCGTTCG CACGCGCGGC GTTCGGCCCG
AACGTCTATC AGGAAACACC GTATCTGCGC GGGCTGCTGT TCGCGAGCGG CCGGCAGGCG
GGCGGCGCGC CGTCGCTGAC GCTGCCCGAC TGGCTCGACG CCGCGCCGGC GCGCACGCCC
GGCGATGCGG GCCTGTTCCT GCACGACGTG TTCGCGCGCG TGCTGCCGGG CGAGCGCGAC
GCGTGGCTGC CCGTCGAGCG GCCGAGCCGC TCGCGGCTCG TGCTGCGGCG CCTCGCGCTC
GCCGCGTGGC TCCTCGCGAG CATCGCGGCC GGGCTGCTGA TGAGCGCATC GTTCGTCGGC
GACATGCGAA CCGTCGAGCT GGTCCGCCGC GACTATCCCG CGCATCCGCG CTTCACCGGC
GAATTCGCGC ACGACACGGC GACGCTCGAG CGGATCGGCC GCGTGATCGC CGACGTCGAG
CGGCGCGACG AGCGGCGGCT CGTGCGCCCG CTCGCCGGCG CGACGCCCGT CGGCCGGCTC
GAAGCGGAAC TCAAGCGCCG CTACGTCGCG CACTATCGGC GCTCGATCGA ACCCACCGCC
GATCGGCTGT TCTTCGGCGA GCCGGACGGC GCGAGCGACG TGCGCGCGGC CGACGATGCG
CGGCTCGCCG CGCGCATCCG CAATCTGGTC CGCTACGTGA ACCTGATGCA GGCGCGCCGG
CGCGGCGCGG ATCGCGAGAC GCTCGCGCAA ATGCCCGCAC CGGCGGTCGC GCGCGCGACG
GATGGCGGTG GCGCTCGCGG AGTGGACAGT GTGGGTGTTT CTGGTGTTTC TGGTGTTTCT
GGTGTTTCTG GTGTTTCTGG TGTTTCTGGT GTTTCTGGTG TTTCTGGCGG TGTAGGCGGT
GTAGGCGGTG CGCGCGCCGC GGAAGGCGCG GGTCGCGCCG TCCGCGCGAG CGGCGGACGG
CGCGCAGGCG ACGCGCGCGC CGCGCGCGGC ATGCGCGGCG CCGCCGGCAA CGCCAGCGCC
GGCGCTGAAA TCGCACCCGC CGCAGACGGC GTTCGCGATC GCGACGAAGG GTTTGCGCGC
GTCAGCGCGC TCGCCGTCGA CCTGATCGCG TGGAGCGCGC CCGACGATCG CGCGCTCGCC
GCGCGCGTCG CGGCCGCGCA GGCAGAGCTC GAACGGCTCG CGTACCGCGA TCCGGACGGC
GCGTGGCTGC TCGCGCTACC GGATGCCTCG ATGCCGCGCG ACGTGACGCT CGCCGATTTC
TGGCCCGCCG CCGAGCCGCG CACGCTGCCC GACGCACAGC CCGCCGCGCT GCGCGACGTG
CGCGTGCCCG CCGCGCTGAC GGCCGCGCAT CGCCCGGCCA TCGATGCGTT CCTCGACGAG
ATGGCGCAGG CGGTCGCGAA CCGGCCGAAG TTCGCGTTCC ATCGCGACGC GTTCGACACG
TGGTACCGCG CACGGCGCAT CGACGCATGG CGCGACTTCG TCGCACGCTT CCCGCAGGGC
GAGCAAGGGC TGACGACGCA AGCGCAATGG CGCGCGGTGA TCGACCGGAT CGCCGATCGC
CGCGATCCGT TCGCGGCATT GCTCGCGCGC GTCGATCGCG AATTCGAATC CGAGCGCGAC
GACACGCTGC CGCCGTGGCT ACGGTTCGTG CGCACGACAT CGCACATGCT CGCCCCCGCG
ATGCTCGCGC CCGCGCGCCT GCCCGCGGCG AGCGGCGGCC TGGGCGCCGC GCTCGGCTCG
ATCTCGCGCA GCGGCGGACG CGCGCTGCGC GAAGCGCTCG GCGGCGCGCC CGAGCAAGGC
AGGCTCACGC TCGAGCGCGA TGCCGCGCTG CGCGACGCGC TTGTCGACTA CGAGCGGCGC
GTCGCCGCGC TCGCCGCCGA TGCGCTTGCG GGCCCCGGCG CCGCGTACCG GCTCGCGGCC
GATTTCCACG GCTTCGGCGT CGATCCGTCC GTCCAGGCTT CCGCGATGCG CGCGGCCGAC
AGCGCGCTGC GCGACGTCAA GCGGCTCGCG GGCGATCGCG ACGTCGGCGG CGACGTCGTC
TGGAGCCTCG TCGGCGGCCC GCTGCGCGCG CTGATCGCGT ATGTCGAGCG GCAGGCGTCG
TGCGCACTGC AGGACGACTG GGAGCGCGAC GTGCTGTGGC CGCTCAGGCG CGCGGCGACG
CGCGACGACG TGGAGGGCTT GCTGTACGGC CCGCAAGGCG CGATCTGGGC GTTCGTCGAC
GGCCCGGCGA AGCCGTTCGT GCGTGTCGGC GCGGCGCGTG CATCGGCGCT CGACACGCTC
GGCTACCGGC TGCCGTTCAC CGACGCGTTC CTGCCGCTCA TCGACGACGC GGCCGCCCGG
CGCGTCGCGC AAGCGCGGCG CGACGCCGAG CGGCGCGCGC AACAGCAGGC GGCGCTCGAG
CTGGACGAGC GGATCGCATC GCTCGGCAAG CAGATCGACG CGCTGCGCGC GCAAACGGTG
CGCTTCGGGA TCGTCGCGCA GCCGACCGAC GTGAACCCGG ATGCGCAGGC CAAGCCGTTC
GAAACCGTGC TGACGCTGCA ATGCGCGCCG CAGGCGCGCA CGCTGACGAA CTACAACCTG
CGCGTGTCCG AGCAGATCGA CTGGCAACCC GATCGATGCG GCGACGCGAC GCTGCGCATC
TCGCTCGGCG GCGTCACGCT CGTGCGCCGT TACGCGGGAT CGCTCGGCGT CGCGCGCTTC
GTCCAGGACT TCCGCTACGG CGTGCGCCGC TTCACGCCCC GCGATTTCCC GGACGCGAAA
GCGCAGCTTC AACGTCTCGG CGTGCGCCAC ATCGACGTGC GTTACGACTT CTCCGGGCAT
GACGCGCTGC TCGCGCACGT CGGTCGGATC GACGCGCTCG AACGCGCGCG CCGCGACGAC
CTCGCGCGGC AGCGGCGCGC CGCGAACCGG CAGGACGACG ACGCGGGCGG CGCGACGGCG
ATCGCGCGGG CGGCGGCGTC CGTCGCGAAT GCGCCGGGCG CCGCGCTGCC CCGCCGCATC
GGCGTGTGTT GGGGGGACCC GGCGCACGAC AGGCCCGATG GCGACGGCGC GCAACCGTGA
|
|---|
| Protein sequence | MFCAALAGWL LCRVARRALR AVRARAQLAR LDASERLPAA DAPELRVAAR WRTALAALGR
AQPAPRLRGR PRDALPWYLV IGPEGAGKTT ALARARLVSP LRHARDDAAI APTEDCDWWC
FDDAVVLDLA GRFAAPGATD DDRRAWHALL EQLGRARARR GVNGVVVAID APRLIEASRD
ALTIEGSAIR ERLEQLIRLF DRRFPVYVLV TQCDRLYGFD EWAAQLAPEQ RERAFGYLGD
HDADAFVARA LDSLDARLGA LRVALAARGE PPSPRALMLP HELACLRPAL EAFARAAFGP
NVYQETPYLR GLLFASGRQA GGAPSLTLPD WLDAAPARTP GDAGLFLHDV FARVLPGERD
AWLPVERPSR SRLVLRRLAL AAWLLASIAA GLLMSASFVG DMRTVELVRR DYPAHPRFTG
EFAHDTATLE RIGRVIADVE RRDERRLVRP LAGATPVGRL EAELKRRYVA HYRRSIEPTA
DRLFFGEPDG ASDVRAADDA RLAARIRNLV RYVNLMQARR RGADRETLAQ MPAPAVARAT
DGGGARGVDS VGVSGVSGVS GVSGVSGVSG VSGVSGGVGG VGGARAAEGA GRAVRASGGR
RAGDARAARG MRGAAGNASA GAEIAPAADG VRDRDEGFAR VSALAVDLIA WSAPDDRALA
ARVAAAQAEL ERLAYRDPDG AWLLALPDAS MPRDVTLADF WPAAEPRTLP DAQPAALRDV
RVPAALTAAH RPAIDAFLDE MAQAVANRPK FAFHRDAFDT WYRARRIDAW RDFVARFPQG
EQGLTTQAQW RAVIDRIADR RDPFAALLAR VDREFESERD DTLPPWLRFV RTTSHMLAPA
MLAPARLPAA SGGLGAALGS ISRSGGRALR EALGGAPEQG RLTLERDAAL RDALVDYERR
VAALAADALA GPGAAYRLAA DFHGFGVDPS VQASAMRAAD SALRDVKRLA GDRDVGGDVV
WSLVGGPLRA LIAYVERQAS CALQDDWERD VLWPLRRAAT RDDVEGLLYG PQGAIWAFVD
GPAKPFVRVG AARASALDTL GYRLPFTDAF LPLIDDAAAR RVAQARRDAE RRAQQQAALE
LDERIASLGK QIDALRAQTV RFGIVAQPTD VNPDAQAKPF ETVLTLQCAP QARTLTNYNL
RVSEQIDWQP DRCGDATLRI SLGGVTLVRR YAGSLGVARF VQDFRYGVRR FTPRDFPDAK
AQLQRLGVRH IDVRYDFSGH DALLAHVGRI DALERARRDD LARQRRAANR QDDDAGGATA
IARAAASVAN APGAALPRRI GVCWGDPAHD RPDGDGAQP
|
|---|
| |