| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0545 |
|---|
| Symbol | |
|---|
| ID | 3694246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | + |
|---|
| Start bp | 737140 |
|---|
| End bp | 739740 |
|---|
| Gene Length | 2601 bp |
|---|
| Protein Length | 866 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637730799 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_335704 |
|---|
| Protein GI | 76817929 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.992342 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCTGAGC CCCGCCGACG TCTGCAAGAC CCCCACGCCG GGCGGCCCCG TGCCCGTCCC
GTATCCGAAC ACCGGCCTGC CGATGATGGC CGCGTCGATC ACGACGAAGG TGCTCGTCTG
CGGCATGCCC GCGCTCACGA AGAAATCGAC GATCCCGATG ACGAACGGCG ATCAGCCGGG
CAGCGCCGGC GGCGTGATGT CGGCGAAGAT CATGGGCAAG GTCGAATTCA CCGCGGGCAG
CGCGAAAGTG AAGTTCGAAG GCGGCGCGGC CGTGCGGCTG ACGACGCCGA CGAAGCACAA
CGAAGGCAAC GCGACGGGCG CCGTGCTGCA GCCGAGCCAG CAGAAAGTGA TGGTGATGAG
CTGAGGCGCG GACATGAACG CACGACACAT TGCCCCGCCG GCCGCGACGC GCGCGCGCCG
GCCGATGCAG CCCGGCCGGC CGTCATGGCC GTCGCGAACG TATCGCGCAT GCGCGGCTCG
CACATGCGCT GCCGTGCTCG TCGCGCTCGC CGCCCTCGCC GGCTGTGCGG CCCGCGTCAC
CGAAGAGCAG GCGCGCGCCG ACGTGCGATG GGACTACGCG CCCGACGCGC TGCGCATCGA
TATCGACGCG TCGGCGCGGT TGAACGAATA CCTGAACGCG CCGCACACGC TGTTGCTCGC
GGTGTTCCAG AGCGCGGACG CGAAGGCGTT CCGCCAGCTC GCCGACGATC CGGACCGGCT
GCGCATGACG CTCGCGGCGG GCGGCCCCGC CGCGGACTTC ATTCAGACGA CCCGCTACGT
CGTCGCGCCC GGCCAGCATG TCGCGCTGTC GATCGATCGC GCGCAGCAGG CGCGCTACGT
CGGCATCGTC GCCGGCTACT ACGACGCCGA CGGCCCACGC GCGGCGCGCC TGTTCGAGGT
GCCGCTGCGC ATCGACAAGC GCGGCTGGTT CTCCTCCACC TATCGCGCCG CGCCGCGAAC
GCTCGAGCTG AAGCTCAGGC TCGGCGCGCA GAGCATCACC GACGCGCGCG AAGCGCCGCT
GAACCTGCCG CCGCCGGGCG CGCGCGCATG GACGGCGCTC GACAGCGGCG CGAAGACCCT
GGCGCTGCCG AGCGCCGACG CGAACGACGG CGGCAGCGGC AAGCGCGACA AACGCGGCAA
CGCCGCCGCC CGTGCGCCGC GCAAGCAATG ACGCACGACG CATCACGAAC CGGAACGAAC
GACATGGACA ACGTCTATTG GCATCAGGGG ATGCTGCTGC AACCGCAACA TTTTCAGTTG
GCCGAACTGC ACCAGCAGTT CCGCTTCGAG CCGTGGCTCG CGTGCGGCCC ACCGCATTTC
TGGGGCGTCG GCGCGCTGTC GCTCGCGCAG GCCGCGATCG ATCGCCGCGT GGTCGAGATC
CGCTCGGCGC GCCTGCTGTT CGCCGATCGC AGCTACGTCG AATATCCGGG CAACGCGGTC
GTCGCCGCGC GCGCGTTCGA TCCCGCGTGG CTCGACGAAG GCCGCGCGCT CGTCGCGCAC
GTCGCGCTCA GGCGGCTCGC GCGCGGCGCG AACAACGTGA CGGTCGCGGC CGCGCCCGAC
GCGCTGCCCG ACGCCCCGAC GCGCTACGCG ACGCTGCCGT CCGCCGAGGA GGTCGCCGAT
CTGCATTCGG ACCATCCGGG CGCGCCGGTG CGCACGCTCA AGCACGTGCT GAAGATCGTG
TTCGAGCACG AGCTCGACGC GCTCGCCGCG CACGAAACGA TCCCGATCGC GCGGATCGTG
CGCGACGGCG AGCGCCTGCG GCTCGACGAC GATTTCGCGC CGCCCTGCTA CGCGCTGTCG
GGCTCGCGCA CGCTGCTCGA GCGCGTGCGC TGCATTCGCG ACGAGCTCGC GGGCCGCGCG
CGGCAGTTGC AGCAGTACAA GAATCCGCGC GAGATGCAAC GCGCCGAATT CGACGCGAGC
TATGCGGCGT TCCTGCTCGC GCTGCGCTCG CTGAACCGCT TCGGCCCGCT GCTGTTCCAT
CTCGCCGAAT GCGACGGGCA GCATCCATGG ACGGTCTACG GCGTGCTGCG CCAACTCGTC
GGCGAGCTGA GCGTGTTCTC CGAGCGCTTC GACATGCTCG GCGAGACGCC CGATGCGCGC
GGCGGCCTGC CGCCGTACGA CCACCGCGAT CTGGGCGGCT GCTTCTCGCG CGCGCACGCG
CTGATCGGCC ACCTGCTCGA CGCAATCGCG GTGGGCCCGG ACTGCGTCGC GACGTTCGAG
CCCGACGGCC CGCAGCAGCC CGCGCAACGC TCGGCGCAAC TGCCGCCCGA CGTGTTCGCG
GATCGCCACC AGATCTATCT CGCGATCCGC AGCGCGCACG ATCCGGACAC GCTCGCGCAA
CGCTTCGCGC TCGGCGGCCG GATCGCGGCG ACCGACGAAA TGCCGCAGCT CACCGCGCTC
GCGCTGCCGG GCGTCGAACT CACCCGCCTG CCCGGCCCGC CGCCGCGGCT GCCGCGCCGC
GGCGACGCGC GCTACTTCCG GATCGAGCAG GCCGGCCGCC CGTGGGACGC GATCCGGCGT
GACGGCCGCG TGTCGCTGCG CTGGGCCGAC GCGCCGGACG ACCTGCACGC GGAACTCGTC
GCGGTGAGGC ACACGCAATG A
|
|---|
| Protein sequence | MPEPRRRLQD PHAGRPRARP VSEHRPADDG RVDHDEGARL RHARAHEEID DPDDERRSAG
QRRRRDVGED HGQGRIHRGQ RESEVRRRRG RAADDADEAQ RRQRDGRRAA AEPAESDGDE
LRRGHERTTH CPAGRDARAP ADAARPAVMA VANVSRMRGS HMRCRARRAR RPRRLCGPRH
RRAGARRRAM GLRARRAAHR YRRVGAVERI PERAAHAVAR GVPERGREGV PPARRRSGPA
AHDARGGRPR RGLHSDDPLR RRARPACRAV DRSRAAGALR RHRRRLLRRR RPTRGAPVRG
AAAHRQARLV LLHLSRRAAN ARAEAQARRA EHHRRARSAA EPAAAGRARM DGARQRREDP
GAAERRRERR RQRQARQTRQ RRRPCAAQAM THDASRTGTN DMDNVYWHQG MLLQPQHFQL
AELHQQFRFE PWLACGPPHF WGVGALSLAQ AAIDRRVVEI RSARLLFADR SYVEYPGNAV
VAARAFDPAW LDEGRALVAH VALRRLARGA NNVTVAAAPD ALPDAPTRYA TLPSAEEVAD
LHSDHPGAPV RTLKHVLKIV FEHELDALAA HETIPIARIV RDGERLRLDD DFAPPCYALS
GSRTLLERVR CIRDELAGRA RQLQQYKNPR EMQRAEFDAS YAAFLLALRS LNRFGPLLFH
LAECDGQHPW TVYGVLRQLV GELSVFSERF DMLGETPDAR GGLPPYDHRD LGGCFSRAHA
LIGHLLDAIA VGPDCVATFE PDGPQQPAQR SAQLPPDVFA DRHQIYLAIR SAHDPDTLAQ
RFALGGRIAA TDEMPQLTAL ALPGVELTRL PGPPPRLPRR GDARYFRIEQ AGRPWDAIRR
DGRVSLRWAD APDDLHAELV AVRHTQ
|
|---|
| |