Gene BURPS1710b_A0535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A0535 
Symbol 
ID3693030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand+ 
Start bp722666 
End bp723175 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content56% 
IMG OID637730789 
Producthypothetical protein 
Protein accessionYP_335694 
Protein GI76819388 
COG category[S] Function unknown 
COG ID[COG3157] Hemolysin-coregulated protein (uncharacterized) 
TIGRFAM ID[TIGR03344] type VI secretion system effector, Hcp1 family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGCCG GAATATATCT CAAGGTCAAA GGAAAAACCC AGGGGGAAAT CAAAGGCTCC 
GTCGTTCAGG AAGGTCATGA CGGGAAAATC CACATCCTCG CCTTCAAGAA CGACTACGAC 
ATGCCTGCCA GGCTCCAGGA AGGCCTGACG CCCGCCGCCG CCGCTCGCGG CACGATCACG 
TTGACGAAGG AAATGGACAG ATCGTCGCCG CAATTCCTGC AGGCGCTCGG CAAGCGCGAG 
ATGATGGAAG AGTTCGAGAT CACGATCCAC CGTCCGAAGA CGGATACAAC AGGTGGGGAC 
CTGACCGAAC TCCTGTTCAC GTACAAGTTC GAAAAAGTGC TGATCACCCA CATGGACCAA 
TACTCGCCCA CGCCGCACAA AGACGATAGC AACGGCATCA AGGAAGGCTT GCTCGGCTAT 
ATCGAGGAGA TCAAGTTCAC GTATTCGGGA TACTCGTTGG AACACGCGGA ATCGGGCATC 
GCGGGCGCCG CAAACTGGAC GAATGGCTGA
 
Protein sequence
MLAGIYLKVK GKTQGEIKGS VVQEGHDGKI HILAFKNDYD MPARLQEGLT PAAAARGTIT 
LTKEMDRSSP QFLQALGKRE MMEEFEITIH RPKTDTTGGD LTELLFTYKF EKVLITHMDQ 
YSPTPHKDDS NGIKEGLLGY IEEIKFTYSG YSLEHAESGI AGAANWTNG