| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0533 |
|---|
| Symbol | |
|---|
| ID | 3692773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | + |
|---|
| Start bp | 720429 |
|---|
| End bp | 720923 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637730788 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_335693 |
|---|
| Protein GI | 76818313 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.56183 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACGA ACGGATCCGT CGCGCCCAAA GAGCGGGTCA ACATCGTCTA TCGCCCGGCG
ACGGGCGACG CACAGGCGGA GGTCGAGCTG CCGCTCAAGG TGCTCGTGCT CGGCGAGTTC
TCGACGGCCG CCGACAAGCC GCCGCTCGAG GAGCTCTCGC CCGTGAACGT CGACAAGGAC
GACTTCAACG ACGTGATGAG GGCGCAGAAC CTCCAGCTCG CGCTCAGCGT GCCGAACCTG
CTGGACGATC AGGCCGGCGA GGACGACCGG CTGTCCGTCA CGCTCGGCTT CGATTCGGTG
CACGATTTCT CGCCCGACGC GATCGTCGAG AAAGTGCCCG AGCTCAAGCA GCTGATCGCG
CTGCGCGACG CGCTGAAAGC GCTGAAGAGC CCGATCGGCA ACATTCCCGG CTTTCGCAGG
CGCATCCAGG AGATCGTCGC CGACAAGGGC GCGCGCAAGC AGTTGCTCGA CGAACTCGGC
CTCGACGAAC AATGA
|
|---|
| Protein sequence | MTTNGSVAPK ERVNIVYRPA TGDAQAEVEL PLKVLVLGEF STAADKPPLE ELSPVNVDKD
DFNDVMRAQN LQLALSVPNL LDDQAGEDDR LSVTLGFDSV HDFSPDAIVE KVPELKQLIA
LRDALKALKS PIGNIPGFRR RIQEIVADKG ARKQLLDELG LDEQ
|
|---|
| |