Gene BURPS1710b_A0530 details

Gene Information

• Locus tag: BURPS1710b_A0530
• ID: 3693379
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007435
• Strand: -
• Start bp: 715726
• End bp: 717609
• Gene Length: 1884 bp
• Protein Length: 627 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 637730784
• Product: ImpA-like N-terminal family protein
• Protein accession: YP_335689
• Protein GI: 76818412
• COG category: [S] Function unknown
• COG ID: [COG3515] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR03362] type VI secretion-associated protein, VC_A0119 family

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.961016
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAAC GGCGCCCGCC CGGCGGCGCG GCGGCGCGCG CGCGCATGCC GATCGATGTC 
GAAGCGCTCG CCGTGCTGGG GCGCACGGAC ATCGATTCCG CCATGCCCGC GGGCGCCGAC 
GTGCGCGCCG ACGCGAGGTT CGACGCGCTG CACGCGGAGC TTGCGAAGCT CGCGTCGCCG 
GGCGCGAGCG GGCAAGTCGA TTGGCGCGCG GCGACGCATC TCGCCGCCGA ATTGCTGCGC 
GAGCGCGGCA AGGATTTGCT CGTCGGCTGC TATCTGGCGG GTGCGTTGCT GCAGACGGGC 
GGCGCGGCGG GGCTGCGCTG CGGACTCGAA ATCGTCGGCG ATCTCGTCGA ACGTCATTGG 
GATGCGATGT CGCCGCCCGT GTCGCGGATG CGGGCGAGGC GCGGGGCGCT GCAATGGCTG 
GTCGATCGCG TCGACGCCAT GCACGATGCA GGAGCCGCCG CATGCGGCGG CGCGTGCTCG 
GCCGAACTGG TCGCGCAATT GCGCGCGGCC GCGCGGCGCA TCGATGCGCT GCTCGCCGAG 
CGCGACGACG ACGCGCCGAC GATGCGCGCG GTGCATGCGT TCGCGGAGCG ATTGCCGGTT 
GAGGTGGTTG AGGTGGTGGA AGTGGCTGAC GAGGCTGATG TGGCTGAGGC GACTGAGGCG 
ACTGAGGCGA CTGAGGCGAC TGAGGCGGCT GATGTGGCTG ATGTGGCTGA GACGGCTGAG 
ACGGCCGAGA CGGCCGAGAC GGCCGAGGCC GATGCGCACG GCTCGACGGG AGGGCCGGCT 
GCGGAAATCG CGATTGCCGC CGCCGAACAG GCTTTGATTG ATCCGGCCGG TCGAGCCGCG 
CCGAGCGCAG GCACGGATAC GAACGCGAAC GCAGACGCCG CCGGGCAACC GGCGCGGCTC 
GACGAAGCGG CCGGCCGCGA ACGCGCGCTC GCCGATGCGC TCGCGCAACT GCATTGCGTC 
GCGACGGCGT TCGCGCAAGC GGACTGGGCC GACGCGCGCG GCTTCCGGCT GCGCCGCGTC 
GCGTGCTGGT CGAGCGTGTG CGCGCTGCCG GAAACGGACG CGGAGAACGG AAGAACGCGG 
ATCGCCGCGC CGAGCGCTTC GATCGTCGGC GCGGCGAAGA GCATCGACGG GGATGGCGAG 
CCCGTGGCGG CGGTGCGCTT CGCCGAAGCG CATGCGCAGG CGTTCCCGCT CTGGCTGGAT 
TTGCAGCGCA TCGCCGCGCG CGCGCTCGCG CGCGCGGGGG GCGACGGCGC CGATGCGCGG 
CGCGAAGTGG AGACGGCGGT TCGTGCGCTG CTTGCGCGGC TGCCGGGCCT CGACGCGCTG 
ACGTTCGCGG ACGGCACGCC GTTCGCCGAC GACGCGACGC GCGCATGGCT CGGCGAGCTT 
GGCGCGCCTG TTGTGGCGGC GGATGCGGTG TCGCCGTCGT CTTTGCCGCT TTCGCCGCGA 
CCTTCGCCGC CTGAGCGATC GTCGCCGATG GCGGGCGAAC CGGCGCGCGC GCCGGGCGAT 
GCGTGCGGGG CGAGCGCCGA CGATGCAGTG GACCGAGCGT GCGCGTTTGC CGCGAGCGGC 
CAGCTCGATC TCGCGCTCCA CGCGATTCAG CATGCGATCG ATCGTGCGAC GAGCGCCGAA 
CAGCGGTTGA GAGCACGCGT GCGGTTGTGC GAGCTTGCGC GCGACCATTG GCCGCATGAG 
GTTCCTGAGG CGTTCGCGCG CGGCGTGATC GAACCGATTC GGCGGCACGA TTTGCTCGCA 
TGGAATCCGG AGCTGGCGCT CGACGGCTTG TCGGCCGCCT ATGCGCTGCT GATTCGGCGC 
GATCGCGAAT CGGCGCACGC GAGGACGGTG CTTGACGAGA TCGCGAGCGT CGACGCGGCG 
CGGGCCATGC GTTTGTCGAC GTGA 

 

Protein sequence

MSERRPPGGA AARARMPIDV EALAVLGRTD IDSAMPAGAD VRADARFDAL HAELAKLASP 
GASGQVDWRA ATHLAAELLR ERGKDLLVGC YLAGALLQTG GAAGLRCGLE IVGDLVERHW 
DAMSPPVSRM RARRGALQWL VDRVDAMHDA GAAACGGACS AELVAQLRAA ARRIDALLAE 
RDDDAPTMRA VHAFAERLPV EVVEVVEVAD EADVAEATEA TEATEATEAA DVADVAETAE 
TAETAETAEA DAHGSTGGPA AEIAIAAAEQ ALIDPAGRAA PSAGTDTNAN ADAAGQPARL 
DEAAGRERAL ADALAQLHCV ATAFAQADWA DARGFRLRRV ACWSSVCALP ETDAENGRTR 
IAAPSASIVG AAKSIDGDGE PVAAVRFAEA HAQAFPLWLD LQRIAARALA RAGGDGADAR 
REVETAVRAL LARLPGLDAL TFADGTPFAD DATRAWLGEL GAPVVAADAV SPSSLPLSPR 
PSPPERSSPM AGEPARAPGD ACGASADDAV DRACAFAASG QLDLALHAIQ HAIDRATSAE 
QRLRARVRLC ELARDHWPHE VPEAFARGVI EPIRRHDLLA WNPELALDGL SAAYALLIRR 
DRESAHARTV LDEIASVDAA RAMRLST