Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A0439 |
Symbol | |
ID | 3694056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | + |
Start bp | 608351 |
End bp | 609718 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637730693 |
Product | type III effector Hop protein |
Protein accession | YP_335598 |
Protein GI | 76817602 |
COG category | [S] Function unknown |
COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACCG ATCAAGCCCT TCGCCCCCTG CTCGGCTGCA TCGCCGACGA TTTCACCGGC GCGACCGATC TCGCGAACAT GCTGGTCAAG AGCGGCATGC GCACCGTGCA GACGATCGGT GTGCCCGCCG CCGGCGCGGC CGTGCCAGCC GATGCGATCG TCGTCGCGCT GAAGTCGCGC ACGATCCCGG CCGCCGACGC GGTCGCGCAA TCGCTCGCCG CGCTCGACTG GCTGCGCGCG CAGGGCTGCC GCCAGTTCTT CTTCAAATAC TGCTCGACGT TCGATTCGAC CGACGCGGGC AACATCGGCC CCGTCGCCGA TGCGCTGCTC GACGCGCTCG GCGGCGAGCG CGCGTTCACG ATCGCGTGCC CCGCGTTCCC CGAGAACGGC CGAACCGTCT ATCGCGGCCA CCTGTTCGTC GGCGACGCGC TGCTCGGCGA ATCCGGGATG GAGAATCATC CGCTCACGCC GATGAAGGAC GCGAATCTCG TGCGCGTGCT GCAGCGGCAA ACGCCGTCGA AAGTCGGGCT GATCCGCCAC GACGCGATCG CGCTCGGCAC CTGCGCCGTG CGCGAGACGA TCGACACGCT GCGCCGCGAG GGCGTCCGCA TCGCGATCGC GGACGCGCTG ACCGACCGCG ATCTGTACGT GCTCGGCGAG GCATGCGCGG ACTTGCCGCT GATCACGGGC GGCTCGGGCG TCGCGCTCGG GCTGCCGTCG AATTTCCGGC TCGGCGGGCT GTTGCCCGAG CGCGGCGACG CGGCGGCGTT GCCCGCGATC GGCGGCGCGT CGGCGGTGCT CGCCGGCAGC GCATCGAAGG CGACCCACGC GCAGGTCGCC GCGTGGCGCG CCGAGCGCCC CGCGTTGCGC ATCGATCCGT TCGCGGCCGC GCGCGGCGAG CCCGTCGTCG ACCAGGCGCT CGCGTTCGCG CGCGCGCATC TGCCGCAGCC GGTGCTGATC TACGCGAGCG CCGCGCCCGA CGAAGTGAAG CAGGTGCAGC AGGCGCTCGG CATCGAAGCC GCCGGCCATC TCGTCGAGGC GACGCTCGCC GCGATCGCGC GCGGGCTGCG CGAGATGGGC GTGCGCAAGT TCGTCGTCGC GGGCGGCGAA ACTTCCGGCG CGGTCGTGCA GGCGCTCGGC GTGAAAGCGC TGCGGATCGG CGCGCAGATC GACCCCGGCG TGCCCGCCAC CGCGACGACC GAAGGAAGTC CCTGTGGGAC GACCGAAGGA AGCCCCTGTG GGGCGACCGA AGGAAGCCCC CGCGGGACGC CCGACGCGCA GCCGCTCGGC CTCGCGCTGA AGTCCGGCAA TTTCGGCTCG GTCGACTTCT TCGAGAAGGC GCTGCGCGCG CTGGAGGGCG CCGCATGA
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Protein sequence | MSTDQALRPL LGCIADDFTG ATDLANMLVK SGMRTVQTIG VPAAGAAVPA DAIVVALKSR TIPAADAVAQ SLAALDWLRA QGCRQFFFKY CSTFDSTDAG NIGPVADALL DALGGERAFT IACPAFPENG RTVYRGHLFV GDALLGESGM ENHPLTPMKD ANLVRVLQRQ TPSKVGLIRH DAIALGTCAV RETIDTLRRE GVRIAIADAL TDRDLYVLGE ACADLPLITG GSGVALGLPS NFRLGGLLPE RGDAAALPAI GGASAVLAGS ASKATHAQVA AWRAERPALR IDPFAAARGE PVVDQALAFA RAHLPQPVLI YASAAPDEVK QVQQALGIEA AGHLVEATLA AIARGLREMG VRKFVVAGGE TSGAVVQALG VKALRIGAQI DPGVPATATT EGSPCGTTEG SPCGATEGSP RGTPDAQPLG LALKSGNFGS VDFFEKALRA LEGAA
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