Gene BURPS1710b_A0439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_A0439 
Symbol 
ID3694056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007435 
Strand
Start bp608351 
End bp609718 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content72% 
IMG OID637730693 
Producttype III effector Hop protein 
Protein accessionYP_335598 
Protein GI76817602 
COG category[S] Function unknown 
COG ID[COG3395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCG ATCAAGCCCT TCGCCCCCTG CTCGGCTGCA TCGCCGACGA TTTCACCGGC 
GCGACCGATC TCGCGAACAT GCTGGTCAAG AGCGGCATGC GCACCGTGCA GACGATCGGT
GTGCCCGCCG CCGGCGCGGC CGTGCCAGCC GATGCGATCG TCGTCGCGCT GAAGTCGCGC
ACGATCCCGG CCGCCGACGC GGTCGCGCAA TCGCTCGCCG CGCTCGACTG GCTGCGCGCG
CAGGGCTGCC GCCAGTTCTT CTTCAAATAC TGCTCGACGT TCGATTCGAC CGACGCGGGC
AACATCGGCC CCGTCGCCGA TGCGCTGCTC GACGCGCTCG GCGGCGAGCG CGCGTTCACG
ATCGCGTGCC CCGCGTTCCC CGAGAACGGC CGAACCGTCT ATCGCGGCCA CCTGTTCGTC
GGCGACGCGC TGCTCGGCGA ATCCGGGATG GAGAATCATC CGCTCACGCC GATGAAGGAC
GCGAATCTCG TGCGCGTGCT GCAGCGGCAA ACGCCGTCGA AAGTCGGGCT GATCCGCCAC
GACGCGATCG CGCTCGGCAC CTGCGCCGTG CGCGAGACGA TCGACACGCT GCGCCGCGAG
GGCGTCCGCA TCGCGATCGC GGACGCGCTG ACCGACCGCG ATCTGTACGT GCTCGGCGAG
GCATGCGCGG ACTTGCCGCT GATCACGGGC GGCTCGGGCG TCGCGCTCGG GCTGCCGTCG
AATTTCCGGC TCGGCGGGCT GTTGCCCGAG CGCGGCGACG CGGCGGCGTT GCCCGCGATC
GGCGGCGCGT CGGCGGTGCT CGCCGGCAGC GCATCGAAGG CGACCCACGC GCAGGTCGCC
GCGTGGCGCG CCGAGCGCCC CGCGTTGCGC ATCGATCCGT TCGCGGCCGC GCGCGGCGAG
CCCGTCGTCG ACCAGGCGCT CGCGTTCGCG CGCGCGCATC TGCCGCAGCC GGTGCTGATC
TACGCGAGCG CCGCGCCCGA CGAAGTGAAG CAGGTGCAGC AGGCGCTCGG CATCGAAGCC
GCCGGCCATC TCGTCGAGGC GACGCTCGCC GCGATCGCGC GCGGGCTGCG CGAGATGGGC
GTGCGCAAGT TCGTCGTCGC GGGCGGCGAA ACTTCCGGCG CGGTCGTGCA GGCGCTCGGC
GTGAAAGCGC TGCGGATCGG CGCGCAGATC GACCCCGGCG TGCCCGCCAC CGCGACGACC
GAAGGAAGTC CCTGTGGGAC GACCGAAGGA AGCCCCTGTG GGGCGACCGA AGGAAGCCCC
CGCGGGACGC CCGACGCGCA GCCGCTCGGC CTCGCGCTGA AGTCCGGCAA TTTCGGCTCG
GTCGACTTCT TCGAGAAGGC GCTGCGCGCG CTGGAGGGCG CCGCATGA
 
Protein sequence
MSTDQALRPL LGCIADDFTG ATDLANMLVK SGMRTVQTIG VPAAGAAVPA DAIVVALKSR 
TIPAADAVAQ SLAALDWLRA QGCRQFFFKY CSTFDSTDAG NIGPVADALL DALGGERAFT
IACPAFPENG RTVYRGHLFV GDALLGESGM ENHPLTPMKD ANLVRVLQRQ TPSKVGLIRH
DAIALGTCAV RETIDTLRRE GVRIAIADAL TDRDLYVLGE ACADLPLITG GSGVALGLPS
NFRLGGLLPE RGDAAALPAI GGASAVLAGS ASKATHAQVA AWRAERPALR IDPFAAARGE
PVVDQALAFA RAHLPQPVLI YASAAPDEVK QVQQALGIEA AGHLVEATLA AIARGLREMG
VRKFVVAGGE TSGAVVQALG VKALRIGAQI DPGVPATATT EGSPCGTTEG SPCGATEGSP
RGTPDAQPLG LALKSGNFGS VDFFEKALRA LEGAA