| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0428 |
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| Symbol | sctV |
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| ID | 3692752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 594935 |
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| End bp | 597052 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637730682 |
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| Product | SctV |
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| Protein accession | YP_335587 |
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| Protein GI | 76818195 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4789] Type III secretory pathway, component EscV |
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| TIGRFAM ID | [TIGR01399] type III secretion protein, HrcV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0489675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAAAT CGCTGAAACT GCCCGCGGGC GGTGAAATCG GAATCGTCGC CCTGGTCATC
GCGATCATCT CGCTGATGAT ACTGCCGCTG CCGCCAGTCG CGATCGACCT GCTGCTCGGC
ATCAACATCA CCATCAGCGT GACGCTGCTG ATGGTGACGA TGTACGTTCC GGATATCGCC
GCGCTGTCCG CGTTTCCGTC GCTCCTGCTG TTCACGACGC TGTTCCGGCT GTCGCTCAAC
ATCGCGTCCA CCAAGTCGAT CCTGCTGCAT GCGGAAGCGG GCAACATTAT CGAGAGCTTT
GGCCAGCTGG TGGTGGGCGG CAACCTCGTC GTGGGCCTGG TCGTATTCGC CATCATCACG
ACCGTGCAAT TCATCGTGAT CGCGAAAGGC TCCGAGCGTG TTGCGGAAGT CGGCGCCCGC
TTCACGCTGG ATGCGCTTCC GGGCAAGCAG ATGAGCATCG ACGCCGATTT GCGCTCCGGC
CTGCTGAGCA CCGAGGAGGC ACGGAAGAAG CGCGCGACGC TGGCGGTCGA AAGCCAATTG
CACGGCGGGA TGGATGGCGC GATGAAATTC GTCAAGGGCG ACGCGATCGC CGGTCTCATC
ATCACGATGA TCAACATCGT CGCGGGCATT GCGGTCGGCG TTGCATATCA CGGAATGTCG
GCGGGCGACG CGGCAAACCG CTTCTCCGTA TTGTCCGTCG GCGACGCGAT GGTGTCGCAG
ATTCCGTCCC TGTTGCTCTC CGTCGCGGCA GGCGTGATGA TCACGCGCGT CACCGACGAG
CGCGCGCCGA AGCGGCGCTC GCTCGGCGAT GAAATCAGCC ACCAGCTCGG CTCGAGCGCG
CGTGCATTGT ATTTCGCAGC GTTTCTCCTG CTCGGCTTCG CCGCCGTGCC GGGCTTCCCC
GCGGCGCTGT TCGTGCTGCT TGCCGCCGCG CTCGCGTTCG CCGGCTATCG ACTGTCACGA
AAGGGTTCGC CATCGTCCGG CGCCGCTCGC GGACAAGAGC AGGAGGCGCT GCGTGCGATG
CAGCGTTCGG GCGCCAAGGC GGACGTCCCT CCGATCCTGC CGCGCGCGCC TCAGTTCGCT
TGCGCCGTCG GCGTTCGGAT CGCGCCGGAT CTCGCGTCCG GTCTTGCGTT GCCGAGGCTC
GACGAAGCGC TCGACCTCGA GCGTGCACGC CTGCAGGACG AACTCGGGCT TCCTTTTCCC
GGCGTGACGA TGTGGATTCA TCCGACGCTC TCGGCAGCAA CCTTCGAAGT GCTGATCCAC
GACGTGCCGC ATCTTTCCGT CACGCTTCCG GCTCGCAAGG CGATGCTGCC GCAGCAAAGG
CATCTGTCGC CCGCTCACGC CGCGCTGACG GACGAGCAAA AGGCGCGGCA CCGGGATTTG
ATCGAACGGA GCGAAGCCGG CCCGCCGATC GACGCAAGCG GCCAAGCGAC CCACTGGATC
GACGAGCCGG CGGTCACCGC GAAGGACAGC GTATGGCGCG CAGAACAGAT CATCGCGTAC
GCATCCGTGG CGGCGATCCG CACTCACGCA CCGCTTTTTG TCGGCATCCA GGAAGTGCAG
TGGATACTCG ATCAGTTGGG CGCCGACTCG CCGGGCCTCG TCGCCGAAGT GCTGAAGATC
TTGCCGTCGA CGCGCATTGC CGATGTGCTA CGCCGCCTGC TTGAAGAGCA GATATCGATC
CGCAACGTGC GAACGATCAT GGAAAGTCTG GTCGCATGGG GCGCGAAGGA GAAAGACATG
CTGATGTTGA CCGAATACGT GCGCGGCGAC CTGTCGCGCT TTCTCGCCCA TCGAGCCGCG
CAAGGCGAAC GCGTGTTGTC CGCGGTCCTG TTCGACCTGC AGGCGGAACA GCACATCCGC
CAGGCGATCA AGCAAACGCC GACAGGCAAT TTCCTCGCAC TGCCCCCGGA CGACGCATCG
CGGCTTGTCG ATCGCATTCA GTCGCTCGTC GGCGCGAACG CCCGCACGGA CATCGCGCTC
GTCACCTCGA TGGACATTCG CCGCTATGTA CGACGAATGA TCGAGCGACG CATCGACTGG
CTAGCCGTGT ATTCGTATCA AGAGCTCGGC GAACACGTCG AGCTGCGTCC GGTCGGCCGC
GTGTCGCTCC AGGGTTGA
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| Protein sequence | MFKSLKLPAG GEIGIVALVI AIISLMILPL PPVAIDLLLG INITISVTLL MVTMYVPDIA
ALSAFPSLLL FTTLFRLSLN IASTKSILLH AEAGNIIESF GQLVVGGNLV VGLVVFAIIT
TVQFIVIAKG SERVAEVGAR FTLDALPGKQ MSIDADLRSG LLSTEEARKK RATLAVESQL
HGGMDGAMKF VKGDAIAGLI ITMINIVAGI AVGVAYHGMS AGDAANRFSV LSVGDAMVSQ
IPSLLLSVAA GVMITRVTDE RAPKRRSLGD EISHQLGSSA RALYFAAFLL LGFAAVPGFP
AALFVLLAAA LAFAGYRLSR KGSPSSGAAR GQEQEALRAM QRSGAKADVP PILPRAPQFA
CAVGVRIAPD LASGLALPRL DEALDLERAR LQDELGLPFP GVTMWIHPTL SAATFEVLIH
DVPHLSVTLP ARKAMLPQQR HLSPAHAALT DEQKARHRDL IERSEAGPPI DASGQATHWI
DEPAVTAKDS VWRAEQIIAY ASVAAIRTHA PLFVGIQEVQ WILDQLGADS PGLVAEVLKI
LPSTRIADVL RRLLEEQISI RNVRTIMESL VAWGAKEKDM LMLTEYVRGD LSRFLAHRAA
QGERVLSAVL FDLQAEQHIR QAIKQTPTGN FLALPPDDAS RLVDRIQSLV GANARTDIAL
VTSMDIRRYV RRMIERRIDW LAVYSYQELG EHVELRPVGR VSLQG
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