| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A0424 |
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| Symbol | sctJ |
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| ID | 3692398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | - |
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| Start bp | 591720 |
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| End bp | 592508 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637730678 |
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| Product | lipoprotein transmembrane protein |
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| Protein accession | YP_335583 |
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| Protein GI | 76818699 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
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| TIGRFAM ID | [TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00546168 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGGCTTC TCGGCGTGCT CGCATTGAGC GTTCTGCTTG CCGGTTGTAA GAAGGAGTTG
TATACCGGCC TGTCCGAGCA GGACGTCAAC GAGATGATGG TCGCCCTCCT CGAGAACGGC
GTCGACGCAT CGAAGGATTC GGCCGATGGA GGCAAGAGCT GGAAGCTGAA CGTCGATGGT
GATCAGCTCG TTCATGCGAT GGAGGTACTG CGCACGCGTG GTTTGCCGCG CAGCAAGTTC
GACGACCTCG GCAACCTGTT CAAGAAGGAC GGCCTCGTTT CGACGCCGAC GGAGGAACGG
ATTCGCTTCA TTTACGGCAT GTCGCAGGAG TTGTCGTCGA CACTGTCGAA AATCGACGGT
GTGCTGGTTG CACGCGTGCA GATCGTGCTT CCGAATAACG ATCCGCTTGC GCAAACAGCC
AAACCGTCAT CGGCGGCCGT ATTCATCAAG TATCGGCCGA GCGCCGACAT CACCGCGCTG
ATTCCGCAGA TCAAGACGCT GGTCATGCAT AGCGTGGAGG GGCTGACCTA CGACCAGGTC
AGCGTGACGG CGGTGGCGGC GGATGCCGTC GACCTTGCGC GATCGCGTCC TGCGGCGGTG
ATCATGCCGC CCTGGCTGGT CGGGCTGCTG GCGTTCGGGG CGATGTCGAT CGCGGCGGCG
GGGCTGTTTG TTGTGTCAAG GCGCCCTTGG ACGAGGGCGG GCGCACATGA AGCCGGCAGC
GCAGCGCCAT GGCGCAAGCG CGTCGCCGAA CTCGCCGCGC ATTTGCGCCG CCGTCAGCGG
GCGAACTGA
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| Protein sequence | MRLLGVLALS VLLAGCKKEL YTGLSEQDVN EMMVALLENG VDASKDSADG GKSWKLNVDG
DQLVHAMEVL RTRGLPRSKF DDLGNLFKKD GLVSTPTEER IRFIYGMSQE LSSTLSKIDG
VLVARVQIVL PNNDPLAQTA KPSSAAVFIK YRPSADITAL IPQIKTLVMH SVEGLTYDQV
SVTAVAADAV DLARSRPAAV IMPPWLVGLL AFGAMSIAAA GLFVVSRRPW TRAGAHEAGS
AAPWRKRVAE LAAHLRRRQR AN
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